Parental gene: | NOLC1, ENSG00000166197 |
| Aliases: | NOLC1, NOPP130, NOPP140, NS5ATP13, P130 |
| Description: | nucleolar and coiled-body phosphoprotein 1 [Source:HGNC Symbol;Acc:15608] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 10:103911932..103923627(+) |
>ENSG00000166197
ATGGCGGACGCCGGCATTCGCCGCGTGGTTCCCAGCGACCTGTATCCCCTCGTGCTCGGCTTCCTGCGCGATAACCAACT
CTCAGAGGTGGCCAATAAGTTCGCCAAAGCGACAGGAGCTACACAGCAGGATGCCAATGCCTCTTCCCTCTTAGACATCT
ATAGCTTCTGGCTCAAGTCTGCCAAGGTCCCAGAGCGAAAGTTACAGGCAAATGGACCAGTGGCTAAGAAAGCTAAGAAG
AAGGCCTCATCCAGTGACAGTGAGGACAGCAGCGAGGAGGAGGAGGAAGTTCAAGGGCCTCCAGCAAAGAAGGCTGCTGT
ACCTGCCAAGCGAGTCGGTCTGCCTCCTGGGAAGGCTGCAGCCAAAGCATCAGAGAGTAGCAGCAGTGAAGAGTCCAGTG
ATGATGATGATGAGGAGGACCAAAAGAAACAGCCTGTCCAGAAGGGAGTTAAGCCCCAAGCCAAGGCAGCCAAAGCTCCT
CCTAAGAAGGCCAAGAGCTCTGATTCTGATTCTGACTCAAGCTCCGAGGATGAGCCACCAAAGAACCAGAAGCCAAAGAT
AACACCTGTGACAGTTAAAGCTCAGACTAAAGCCCCTCCCAAACCAGCTCGAGCAGCACCTAAAATAGCCAATGGTAAAG
CAGCCAGTAGCAGCAGTAGCAGCAGCAGCAGCAGTAGCAGTGATGACTCAGAGGAGGAGAAGGCAGCAGCCACCCCCAAG
AAGACTGTACCTAAAAAGCAAGTTGTGGCCAAGGCCCCAGTGAAAGCAGCTACCACCCCTACCCGGAAGAGTTCTAGCAG
TGAGGATTCCTCCAGTGACGAGGAAGAGGAGCAAAAAAAACCCATGAAAAATAAACCAGGTCCCTACAGTTCAGTCCCCC
CGCCTTCTGCTCCCCCACCAAAGAAGTCTCTGGGAACCCAGCCTCCCAAGAAGGCTGTGGAGAAGCAGCAGCCTGTGGAA
AGCAGTGAAGACAGCAGTGATGAGTCTGATTCAAGTTCTGAAGAAGAGAAGAAACCCCCAACTAAGGCAGTAGTCTCTAA
AGCAACCACTAAACCACCTCCAGCAAAGAAAGCAGCAGAGAGCTCTTCAGACAGCTCAGACTCTGACAGCTCTGAGGATG
ATGAAGCTCCTTCTAAGCCAGCTGGTACCACCAAGAATTCTTCAAATAAGCCAGCTGTCACCACCAAGTCACCTGCAGTG
AAGCCAGCTGCAGCCCCCAAGCAACCTGTGGGCGGTGGCCAGAAGCTTCTGACGAGAAAGGCTGACAGCAGCTCCAGTGA
GGAAGAGAGCAGCTCCAGTGAGGAGGAGAAGACAAAGAAGATGGTGGCCACCACTAAGCCCAAGGCGACTGCCAAAGCAG
CTCTATCTCTGCCTGCCAAGCAGGCTCCTCAGGGTAGTAGGGACAGCAGCTCTGATTCAGACAGCTCCAGCAGTGAGGAG
GAGGAAGAGAAGACATCTAAGTCTGCAGTTAAGAAGAAGCCACAGAAGGTAGCAGGAGGTGCAGCCCCTTCCAAGCCAGC
CTCTGCAAAGAAAGGAAAGGCTGAGAGCAGCAACAGTTCTTCTTCTGATGACTCCAGTGAGGAAGAGGAAGAGAAGCTCA
AGGGCAAGGGCTCTCCAAGACCACAAGCCCCCAAGGCCAATGGCACCTCTGCACTGACTGCCCAGAATGGAAAAGCAGCT
AAGAACAGTGAGGAGGAGGAAGAAGAAAAGAAAAAGGCGGCAGTGGTAGTTTCCAAATCAGGTTCATTAAAGAAGCGGAA
GCAGAATGAGGCTGCCAAGGAGGCAGAGACTCCTCAGGCCAAGAAGATAAAGCTTCAGACCCCTAACACATTTCCAAAAA
GGAAGAAAGGAGAAAAAAGGGCATCATCCCCATTCCGAAGGGTCAGGGAGGAGGAAATTGAGGTGGATTCACGAGTTGCG
GACAACTCCTTTGATGCCAAGCGAGGTGCAGCCGGAGACTGGGGAGAGCGAGCCAATCAGGTTTTGAAGTTCACCAAAGG
CAAGTCCTTTCGGCATGAGAAAACCAAGAAGAAGCGGGGCAGCTACCGGGGAGGCTCAATCTCTGTCCAGGTCAATTCTA
TTAAGTTTGACAGCGAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_adipose | 63 .17 RPM |
| bodymap2_adrenal | 94 .36 RPM |
| bodymap2_brain | 99 .34 RPM |
| bodymap2_breast | 45 .21 RPM |
| bodymap2_colon | 95 .73 RPM |
| bodymap2_heart | 36 .39 RPM |
| bodymap2_kidney | 63 .96 RPM |
| bodymap2_liver | 37 .26 RPM |
| bodymap2_lung | 93 .48 RPM |
| bodymap2_lymph_node | 70 .99 RPM |
| bodymap2_ovary | 112 .89 RPM |
| bodymap2_prostate | 97 .06 RPM |
| bodymap2_skeletal_muscle | 76 .63 RPM |
| bodymap2_testis | 88 .63 RPM |
| bodymap2_thyroid | 92 .10 RPM |
| bodymap2_white_blood_cells | 97 .34 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000010062 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000017832 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000015012 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000002595 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000023882 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000014974 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_4781 | 64.73 | 83.69 | Please wait, loading  |
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Download FASTA sequences of all ENSG00000166197 retrocopies