Parental gene:

ENSOCUG00000013679

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL018716:9310..11962(-)


>ENSOCUG00000013679
ATGGCGATGGCGGCAGGCAACGCGGCCTACTTCCAGAGGGGCAGTGTGTTCTGGTTGGCGGTCATCACGCTCTCCTTTGG
CTACTACACGTGGGTTGTCCTCTGGCCGCAGAGCATCCCTTATGAGAGCCTTGGGCTCCTGGGCTCGTTCACTCAGTACC
TGGTGGACCATCATCACACCCTCCTGCACAACGGGTATTGGTTTGCCTGGATGATTCACGTGGCAGAGTCCTTGTATGCC
ATGGTGCTGTGCAAGTAA

Library Parental gene expression (RPM)
SRP017611_brain 6 .95 RPM
SRP017611_kidney 10 .24 RPM
SRP017611_liver 3 .16 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012986 ortholog_one2many 4 retrogenes
retro_amel_1410, retro_amel_1554, retro_amel_1777, retro_amel_821,
Bos taurus ENSBTAG00000001656 ortholog_one2many 1 retrogene
retro_btau_316,
Canis familiaris ENSCAFG00000015748 possible_ortholog 3 retrogenes
retro_cfam_602, retro_cfam_635, retro_cfam_637,
Callithrix jacchus ENSCJAG00000007670 possible_ortholog 1 retrogene
retro_cjac_3839,
Dasypus novemcinctus ENSDNOG00000024625 possible_ortholog 1 retrogene
retro_dnov_555,
Felis catus ENSFCAG00000026147 possible_ortholog 1 retrogene
retro_fcat_401,
Homo sapiens ENSG00000133678 ortholog_one2many 1 retrogene
retro_hsap_1692,
Myotis lucifugus ENSMLUG00000007585 possible_ortholog 16 retrogenes
retro_mluc_1178, retro_mluc_2482, retro_mluc_2491, retro_mluc_2492, retro_mluc_2528, retro_mluc_2532, retro_mluc_2550, retro_mluc_2551, retro_mluc_2552, retro_mluc_2572, retro_mluc_2573, retro_mluc_2583, retro_mluc_2586, retro_mluc_2603, retro_mluc_2623, retro_mluc_766,
Macaca mulatta ENSMMUG00000003015 possible_ortholog 1 retrogene
retro_mmul_1583,
Mustela putorius furo ENSMPUG00000003613 ortholog_one2many 2 retrogenes
retro_mputfur_400, retro_mputfur_407,
Mus musculus ENSMUSG00000072676 possible_ortholog 1 retrogene
retro_mmus_2102,
Nomascus leucogenys ENSNLEG00000010657 ortholog_one2many 1 retrogene
retro_nleu_1337,
Otolemur garnettii ENSOGAG00000028898 possible_ortholog 1 retrogene
retro_ogar_59,
Pongo abelii ENSPPYG00000002293 ortholog_one2many 1 retrogene
retro_pabe_1393,
Tarsius syrichta ENSTSYG00000006920 possible_ortholog 1 retrogene
retro_tsyr_103,
Tursiops truncatus ENSTTRG00000006122 possible_ortholog 1 retrogene
retro_ttru_454,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_453 62.82 90.59
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSOCUG00000013679 retrocopies