Parental gene:

Tmem254a, ENSMUSG00000072676

Aliases:None
Description:transmembrane protein 254a [Source:MGI Symbol;Acc:MGI:1196450]
Organism:Mouse (Mus musculus)
Coordinates:14:25924786..25927384(-)


>ENSMUSG00000072676
ATGGTGGTGGCGAAGTCGGAGGCCCGTAGGGACCCCACTGCATACTTCCGTGTAGCCAGACTCTGGCCCTCACTGATCAC
CGCCCTAGGGCTGGGCTACTTCGCGTGGGCTGTCTTCTGGCCTCAGAGCATCCCTTATCAGAGCCTTGGGCCCCTGGGTC
CCTTCACGAAGTATTTGGTGGACCACTATCACACCTTCCTAAGGAATGGGTATTGGCTTGCTTGGCTAATTCATGTGGGA
GAGTCCTTGTATGCCTTGGTTTTATGCAAGCGTAAAGGAATCACAGACGTCCAGGCCCAGCTCCTCTGGTTCCTACAGAC
TTTTCTGTTTGGTGTAGCCTCTCTCTCCATCCTGATTGCTTACAGATCAAAGCGCCAAAAACACAATTAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012986 possible_ortholog 4 retrogenes
retro_amel_1410, retro_amel_1554, retro_amel_1777, retro_amel_821,
Bos taurus ENSBTAG00000001656 possible_ortholog 1 retrogene
retro_btau_316,
Canis familiaris ENSCAFG00000015748 ortholog_one2many 3 retrogenes
retro_cfam_602, retro_cfam_635, retro_cfam_637,
Callithrix jacchus ENSCJAG00000007670 ortholog_one2many 1 retrogene
retro_cjac_3839,
Dasypus novemcinctus ENSDNOG00000024625 ortholog_one2many 1 retrogene
retro_dnov_555,
Felis catus ENSFCAG00000026147 ortholog_one2many 1 retrogene
retro_fcat_401,
Homo sapiens ENSG00000133678 possible_ortholog 1 retrogene
retro_hsap_1692,
Myotis lucifugus ENSMLUG00000007585 ortholog_one2many 16 retrogenes
retro_mluc_1178, retro_mluc_2482, retro_mluc_2491, retro_mluc_2492, retro_mluc_2528, retro_mluc_2532, retro_mluc_2550, retro_mluc_2551, retro_mluc_2552, retro_mluc_2572, retro_mluc_2573, retro_mluc_2583, retro_mluc_2586, retro_mluc_2603, retro_mluc_2623, retro_mluc_766,
Macaca mulatta ENSMMUG00000003015 ortholog_one2many 1 retrogene
retro_mmul_1583,
Mustela putorius furo ENSMPUG00000003613 possible_ortholog 2 retrogenes
retro_mputfur_400, retro_mputfur_407,
Nomascus leucogenys ENSNLEG00000010657 possible_ortholog 1 retrogene
retro_nleu_1337,
Oryctolagus cuniculus ENSOCUG00000013679 possible_ortholog 1 retrogene
retro_ocun_453,
Otolemur garnettii ENSOGAG00000028898 ortholog_one2many 1 retrogene
retro_ogar_59,
Pongo abelii ENSPPYG00000002293 possible_ortholog 1 retrogene
retro_pabe_1393,
Tarsius syrichta ENSTSYG00000006920 ortholog_one2many 1 retrogene
retro_tsyr_103,
Tursiops truncatus ENSTTRG00000006122 ortholog_one2many 1 retrogene
retro_ttru_454,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_2102 76.92 84.55
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Download FASTA sequences of all ENSMUSG00000072676 retrocopies