Parental gene:

PABPN1, ENSNLEG00000015009

Aliases:None
Description:poly(A) binding protein, nuclear 1 [Source:HGNC Symbol;Acc:8565]
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397280.1:2487489..2492153(+)


>ENSNLEG00000015009
ATGGCGGCGGCGGCGGCGGCGGCAGCAGCAGCGGGGGCTGCGGGCCGGGGCTCCGGGCCGGGGCGGCGGCGCCATCTTCC
CGGGGCCGGTGGGGAGGCCGGGGAGGGGGGCCCCGGGGGGCGCAGGGGTTACGGGAACGGCGAGTCTGAGGAATTGGAGC
CTGAGGAGCTGCTGCTGGAGCCCGAGCCGGAGCCCGAGCCCGAAGAGGAGCCGCCCCGGCCCCGCGCCCCCCCGGGAGCT
CCGGGCCCTGGGCCTGGTTCGGGAGCCCCCGGCAGCCAAGAGGAGGAGGAGGAGCCGGGACTGGTCGAGGGTGACCCGGG
GGACGGCGCCATTGAGGACCCGGAGCTGGAAGCTATCAAAGCTCGAGTCAGGGAGATGGAGGAAGAAGCTGAGAAGCTAA
AGGAGCTACAGAACGAGGTAGAGAAGCAGATGAATATGAGTCCACCTCCAGGCAATGCTGGCCCAGTGATCATGTCCATT
GAGGAGAAGATGGAGGCTGATGCCCGTTCCATCTATGTTGGCAATGTGGACTATGGTGCAACAGCAGAAGAGCTGGAAGC
TCACTTTCATGGCTGTGGTTCAGTCAACCGTGTTACCATACTCTGTGACAAATTTAGTGGCCATCCCAAAGGGTTTGCAT
ATATAGAGTTCTCAGACAAAGAGTCAGTGAGGACTTCCTTGGCCTTAGATGAGTCCCTGTTTAGAGGAAGGCAAATCAAG
GTGATCCCAAAACGAACCAACAGACCAGGCATCAGCACAACAGACCGGGGTTTTCCACGAGCCCGCTACCGCGCCCGGAC
CACCAACTACAACAGTTCCCGCTCTCGATTCTACAGTGGTTTTAACAGCAGGCCCCGGGGTCGCGTCTACAGGGGCCGGG
CTAGAGCGACATCATGGTATTCCCCTTACTAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000006884 ortholog_one2one 1 retrogene
retro_btau_693,
Callithrix jacchus ENSCJAG00000007960 ortholog_one2one 4 retrogenes
retro_cjac_1263, retro_cjac_2291, retro_cjac_3278, retro_cjac_3836,
Dipodomys ordii ENSDORG00000002873 ortholog_one2one 1 retrogene
retro_dord_606,
Homo sapiens ENSG00000100836 ortholog_one2one 1 retrogene
retro_hsap_4855,
Gorilla gorilla ENSGGOG00000022683 ortholog_one2one 2 retrogenes
retro_ggor_1454, retro_ggor_3030,
Mustela putorius furo ENSMPUG00000006775 ortholog_one2one 1 retrogene
retro_mputfur_496,
Mus musculus ENSMUSG00000022194 possible_ortholog 1 retrogene
retro_mmus_403,
Otolemur garnettii ENSOGAG00000008710 ortholog_one2one 1 retrogene
retro_ogar_797,
Pongo abelii ENSPPYG00000005663 ortholog_one2one 2 retrogenes
retro_pabe_1645, retro_pabe_3773,
Pan troglodytes ENSPTRG00000006168 ortholog_one2one 2 retrogenes
retro_ptro_1339, retro_ptro_3232,
Sus scrofa ENSSSCG00000002023 ortholog_one2one 1 retrogene
retro_sscr_625,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_2066 82.49 57.43
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2. retro_nleu_3023 77.45 99.01
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Download FASTA sequences of all ENSNLEG00000015009 retrocopies