Parental gene:

Cfl1, ENSMUSG00000056201

Aliases:None
Description:cofilin 1, non-muscle [Source:MGI Symbol;Acc:MGI:101757]
Organism:Mouse (Mus musculus)
Coordinates:19:5490484..5494029(+)


>ENSMUSG00000056201
ATGGCCTCTGGTGTGGCTGTCTCTGATGGTGTCATCAAGGTGTTCAATGACATGAAGGTTCGCAAGTCTTCAACACCAGA
AGAAGTGAAGAAACGCAAGAAGGCGGTGCTCTTTTGCCTGAGTGAGGACAAGAAGAACATCATCCTGGAGGAGGGCAAGG
AGATCCTGGTAGGAGATGTGGGGCAGACTGTGGACGACCCCTACACCACTTTTGTCAAGATGCTGCCAGACAAGGACTGC
CGCTATGCACTCTATGATGCAACCTATGAGACCAAGGAGAGCAAGAAGGAGGACCTGGTGTTCATCTTCTGGGCCCCCGA
GAATGCACCCCTCAAGAGCAAAATGATCTATGCCAGCTCCAAGGATGCCATCAAGAAGAAGCTGACAGGAATCAAGCATG
AATTACAAGCTAACTGCTACGAGGAGGTCAAGGACCGCTGCACCCTGGCAGAGAAACTAGGTGGCAGCGCCGTCATTTCC
CTGGAGGGCAAGCCTTTGAGCCACCCAGCCCCCTGCCTGGAGCATCTTAACAGCCCCAGACCTGCTCTTGGGTGTTGCAG
GCTGCCCCTTTCCTGCCAGACCGGAGGGGCTGGGGGGATCCCAGCAGGGGGAGGGCTATCCCTTCACCCCAGTTGCCAAA
CATCCCTCCCACCCCCTGGACCGTCCTTCTCCCTCCATCCCTGA

Library Parental gene expression (RPM)
SRP007412_brain 385 .58 RPM
SRP007412_cerebellum 286 .45 RPM
SRP007412_heart 80 .81 RPM
SRP007412_kidney 152 .73 RPM
SRP007412_liver 115 .90 RPM
SRP007412_testis 106 .85 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000024955 possible_ortholog 6 retrogenes
retro_cfam_1544, retro_cfam_366, retro_cfam_660, retro_cfam_67, retro_cfam_943, retro_cfam_964,
Callithrix jacchus ENSCJAG00000001916 possible_ortholog 1 retrogene
retro_cjac_347,
Felis catus ENSFCAG00000013272 possible_ortholog 3 retrogenes
retro_fcat_1456, retro_fcat_303, retro_fcat_991,
Myotis lucifugus ENSMLUG00000024685 possible_ortholog 6 retrogenes
retro_mluc_1905, retro_mluc_2114, retro_mluc_216, retro_mluc_2218, retro_mluc_455, retro_mluc_507,
Macaca mulatta ENSMMUG00000019016 possible_ortholog 5 retrogenes
retro_mmul_316, retro_mmul_493, retro_mmul_556, retro_mmul_667, retro_mmul_705,
Mus musculus ENSMUSG00000015932 within_species_paralog 1 retrogene
retro_mmus_3314,
Mus musculus ENSMUSG00000062929 within_species_paralog 1 retrogene
retro_mmus_660,
Oryctolagus cuniculus ENSOCUG00000025604 possible_ortholog 4 retrogenes
retro_ocun_1123, retro_ocun_1390, retro_ocun_324, retro_ocun_478,
Otolemur garnettii ENSOGAG00000016503 possible_ortholog 8 retrogenes
retro_ogar_1442, retro_ogar_1581, retro_ogar_1648, retro_ogar_2192, retro_ogar_302, retro_ogar_405, retro_ogar_453, retro_ogar_828,
Rattus norvegicus ENSRNOG00000020660 ortholog_one2one 2 retrogenes
retro_rnor_1354, retro_rnor_693,
Tupaia belangeri ENSTBEG00000016751 ortholog_one2one 2 retrogenes
retro_tbel_153, retro_tbel_3085,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_719 58.55 65.64
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2. retro_mmus_970 63.55 90.75
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3. retro_mmus_1729 64.39 55.95
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4. retro_mmus_2103 73.53 74.45
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5. retro_mmus_3127 98.19 73.13
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6. retro_mmus_3556 81.82 100.00
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Download FASTA sequences of all ENSMUSG00000056201 retrocopies