Parental gene:

Rps19, ENSMUSG00000040952

Aliases:Rps19, Dsk3
Description:ribosomal protein S19 [Source:MGI Symbol;Acc:MGI:1333780]
Organism:Mouse (Mus musculus)
Coordinates:7:24884370..24889806(+)


>ENSMUSG00000040952
ATGCCCGGAGTTACTGTAAAAGACGTTAACCAGCAGGAGTTCGTCAGAGCTCTGGCAGCCTTCCTCAAAAAGTCCGGGAA
GCTGAAAGTCCCCGAATGGGTGGACACAGTCAAGCTGGCCAAACATAAAGAGCTTGCCCCATATGATGAGAACTGGTTCT
ACACACGAGCTGCTTCCACAGCACGGCACCTGTACCTCCGAGGTGGTGCTGGGGTTGGTTCCATGACCAAGATCTATGGA
GGACGGCAGAGAAACGGTGTCAGACCCAGCCATTTCAGCAGAGGCTCTAAGAGTGTGGCCCGCCGGGTCCTCCAAGCCCT
GGAGGGGCTGAAAATGGTGGAAAAGGACCAAGATGGGGGCCGCAAGCTGACGCCTCAGGGACAGAGAGACCTGGACAGGA
TCGCTGGACAGGTGGCAGCTGCCAACAAGAAGCATTAG

Library Parental gene expression (RPM)
SRP007412_brain 27 .33 RPM
SRP007412_cerebellum 7 .38 RPM
SRP007412_heart 33 .18 RPM
SRP007412_kidney 20 .48 RPM
SRP007412_liver 25 .26 RPM
SRP007412_testis 11 .30 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000028485 possible_ortholog 10 retrogenes
retro_cfam_1017, retro_cfam_1074, retro_cfam_1155, retro_cfam_1251, retro_cfam_1377, retro_cfam_149, retro_cfam_1998, retro_cfam_2212, retro_cfam_249, retro_cfam_499,
Callithrix jacchus ENSCJAG00000020243 possible_ortholog 5 retrogenes
retro_cjac_1968, retro_cjac_2004, retro_cjac_2094, retro_cjac_2324, retro_cjac_3,
Dasypus novemcinctus ENSDNOG00000002376 ortholog_one2one 4 retrogenes
retro_dnov_1084, retro_dnov_1124, retro_dnov_1838, retro_dnov_2456,
Equus caballus ENSECAG00000009738 ortholog_one2one 2 retrogenes
retro_ecab_263, retro_ecab_815,
Macaca mulatta ENSMMUG00000013429 ortholog_one2one 8 retrogenes
retro_mmul_1201, retro_mmul_1358, retro_mmul_1807, retro_mmul_2007, retro_mmul_2443, retro_mmul_404, retro_mmul_607, retro_mmul_691,
Monodelphis domestica ENSMODG00000010067 ortholog_one2one 3 retrogenes
retro_mdom_1531, retro_mdom_1888, retro_mdom_883,
Mustela putorius furo ENSMPUG00000007164 ortholog_one2one 4 retrogenes
retro_mputfur_1071, retro_mputfur_1148, retro_mputfur_1470, retro_mputfur_1503,
Otolemur garnettii ENSOGAG00000026255 ortholog_one2one 3 retrogenes
retro_ogar_1315, retro_ogar_1663, retro_ogar_2305,
Rattus norvegicus ENSRNOG00000048199 ortholog_one2many 3 retrogenes
retro_rnor_221, retro_rnor_299, retro_rnor_51,
Sus scrofa ENSSSCG00000003042 possible_ortholog 3 retrogenes
retro_sscr_1064, retro_sscr_308, retro_sscr_58,
Ictidomys tridecemlineatus ENSSTOG00000003502 ortholog_one2one 3 retrogenes
retro_itri_256, retro_itri_751, retro_itri_872,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_639 80.27 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_mmus_643 91.03 100.00
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_mmus_684 84.35 100.00
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_mmus_899 100.00 100.00
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_mmus_1206 97.93 100.00
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_mmus_1207 97.93 100.00
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_mmus_1528 83.33 94.48
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_mmus_1711 82.07 100.00
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_mmus_1713 98.62 100.00
Please wait, loading
Please wait, loading
Please wait, loading
10. retro_mmus_2095 96.55 100.00
Please wait, loading
Please wait, loading
Please wait, loading
11. retro_mmus_2295 67.11 99.31
Please wait, loading
Please wait, loading
Please wait, loading
12. retro_mmus_2535 95.10 98.62
Please wait, loading
Please wait, loading
Please wait, loading
13. retro_mmus_2850 92.70 94.48
Please wait, loading
Please wait, loading
Please wait, loading
14. retro_mmus_3337 78.08 99.31
Please wait, loading
Please wait, loading
Please wait, loading
15. retro_mmus_3499 77.55 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMUSG00000040952 retrocopies