Parental gene:

Polr2c, ENSMUSG00000031783

Aliases:Polr2c, 33kDa, RPB3, Rpo2-3, mRBP31
Description:polymerase (RNA) II (DNA directed) polypeptide C [Source:MGI Symbol;Acc:MGI:109299]
Organism:Mouse (Mus musculus)
Coordinates:8:94857449..94864242(+)


>ENSMUSG00000031783
ATGCCGTACGCCAACCAGCCAACAGTGCGGATCACGGAACTCACCGAAGAGAACGTCAAGTTCATTATCGAGAACACGGA
CCTGGCGGTGGCCAATTCCATTCGGAGGGTCTTCATCGCAGAGGTGCCCATAATAGCCATCGACTGGGTTCAGATTGACG
CCAACTCCTCGGTCCTTCATGATGAATTCATCGCGCACAGGCTTGGTTTAATCCCCCTCACTAGTGATGACATTGTGGAC
AAGCTGCAGTACTCCCGGGACTGCACATGTGAAGAGTTCTGCCCTGAGTGTTCTGTGGAGTTCACTCTCGATGTGAGGTG
CAATGAAGACCAGACGCGCCATGTCACCTCCCGAGATCTCATCTCCAACAGCCCCCGGGTTATTCCGGTGACATCTCGGA
ACCGGGATAACGACCCTAATGACTATGTGGAGCAGGATGACATCCTTATTGTCAAGCTGAGGAAGGGGCAGGAGCTGAGA
CTTCGAGCCTATGCCAAGAAGGGCTTTGGCAAGGAACATGCCAAGTGGAACCCTACTGCGGGGGTAGCTTTTGAATACGA
TCCAGACAACGCACTTAGGCATACAGTGTATCCCAAGCCTGAGGAATGGCCCAAGAGTGAGTATTCCGAGCTGGATGAGG
ATGAGTCGCAGGCTCCCTACGACCCCAACGGCAAGCCAGAGAGGTTTTACTACAATGTGGAGTCGTGTGGCTCACTGCGC
CCTGAAACCATTGTCCTCTCAGCCCTGTCGGGGCTAAAGAAGAAGCTGAGTGATTTACAGACTCAGTTAAGCCATGAGAT
CCAGAGTGACGTGCTCACCATAAACTAG

Library Parental gene expression (RPM)
SRP007412_brain 17 .08 RPM
SRP007412_cerebellum 19 .41 RPM
SRP007412_heart 22 .94 RPM
SRP007412_kidney 17 .96 RPM
SRP007412_liver 8 .68 RPM
SRP007412_testis 11 .57 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000008720 ortholog_one2one 1 retrogene
retro_cfam_688,
Choloepus hoffmanni ENSCHOG00000002986 ortholog_one2one 1 retrogene
retro_chof_1988,
Callithrix jacchus ENSCJAG00000012016 ortholog_one2one 1 retrogene
retro_cjac_2026,
Dipodomys ordii ENSDORG00000000081 ortholog_one2one 1 retrogene
retro_dord_704,
Echinops telfairi ENSETEG00000004185 ortholog_one2one 1 retrogene
retro_etel_1953,
Homo sapiens ENSG00000102978 ortholog_one2one 1 retrogene
retro_hsap_2496,
Gorilla gorilla ENSGGOG00000012415 ortholog_one2one 1 retrogene
retro_ggor_1557,
Myotis lucifugus ENSMLUG00000015833 ortholog_one2many 2 retrogenes
retro_mluc_129, retro_mluc_236,
Macaca mulatta ENSMMUG00000020474 ortholog_one2one 1 retrogene
retro_mmul_1674,
Nomascus leucogenys ENSNLEG00000003034 ortholog_one2one 1 retrogene
retro_nleu_1431,
Otolemur garnettii ENSOGAG00000016866 ortholog_one2many 1 retrogene
retro_ogar_3361,
Ochotona princeps ENSOPRG00000006979 ortholog_one2one 1 retrogene
retro_opri_445,
Pongo abelii ENSPPYG00000007390 ortholog_one2one 1 retrogene
retro_pabe_1839,
Pan troglodytes ENSPTRG00000008157 ortholog_one2one 1 retrogene
retro_ptro_1448,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1723 97.08 86.91
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Download FASTA sequences of all ENSMUSG00000031783 retrocopies