Parental gene:

POLR2C, ENSG00000102978

Aliases:POLR2C, RPB3, RPB31, hRPB33, hsRPB3
Description:polymerase (RNA) II (DNA directed) polypeptide C, 33kDa [Source:HGNC Symbol;Acc:9189]
Organism:Human (Homo sapiens)
Coordinates:16:57496298..57505922(+)


>ENSG00000102978
ATGCCGTACGCCAACCAGCCTACCGTGCGGATCACGGAGCTCACTGACGAGAATGTCAAGTTCATCATCGAGAACACCGA
CCTGGCGGTGGCCAATTCGATTCGGAGGGTCTTCATCGCTGAGGTTCCCATAATAGCCATTGACTGGGTTCAGATTGATG
CCAATTCCTCAGTTCTTCATGATGAATTCATTGCTCACAGGCTTGGATTAATTCCCCTCATTAGTGATGACATTGTGGAC
AAGCTGCAGTACTCTCGGGACTGCACATGTGAGGAGTTCTGCCCCGAGTGCTCGGTGGAGTTCACCCTCGATGTGCGGTG
CAATGAAGACCAGACGCGACATGTCACGTCTCGAGACCTCATCTCCAACAGCCCCCGGGTCATTCCGGTGACATCCCGGA
ACCGAGATAATGACCCCAATGACTACGTGGAGCAGGATGACATCCTCATCGTCAAGTTGAGAAAGGGCCAGGAGCTGAGA
CTTCGAGCCTATGCCAAAAAGGGCTTTGGCAAGGAGCATGCCAAGTGGAACCCTACTGCAGGGGTGGCTTTTGAATACGA
TCCAGACAATGCCCTGAGGCACACAGTGTACCCCAAGCCCGAGGAATGGCCAAAGAGTGAGTACTCGGAGCTGGATGAGG
ATGAGTCGCAGGCTCCCTATGACCCCAACGGCAAGCCAGAAAGGTTTTACTACAATGTGGAGTCCTGTGGCTCTCTGCGT
CCTGAAACCATTGTCCTGTCAGCCCTCTCAGGATTGAAGAAGAAACTGAGTGATTTACAAACTCAATTAAGCCACGAGAT
CCAGAGTGATGTGCTAACCATAAATTAA

Library Parental gene expression (RPM)
bodymap2_adipose 30 .06 RPM
bodymap2_adrenal 39 .85 RPM
bodymap2_brain 44 .02 RPM
bodymap2_breast 32 .00 RPM
bodymap2_colon 31 .11 RPM
bodymap2_heart 34 .78 RPM
bodymap2_kidney 55 .07 RPM
bodymap2_liver 37 .30 RPM
bodymap2_lung 31 .73 RPM
bodymap2_lymph_node 39 .29 RPM
bodymap2_ovary 55 .63 RPM
bodymap2_prostate 66 .79 RPM
bodymap2_skeletal_muscle 47 .51 RPM
bodymap2_testis 41 .25 RPM
bodymap2_thyroid 54 .76 RPM
bodymap2_white_blood_cells 50 .81 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000008720 ortholog_one2one 1 retrogene
retro_cfam_688,
Choloepus hoffmanni ENSCHOG00000002986 ortholog_one2one 1 retrogene
retro_chof_1988,
Callithrix jacchus ENSCJAG00000012016 ortholog_one2one 1 retrogene
retro_cjac_2026,
Dipodomys ordii ENSDORG00000000081 ortholog_one2one 1 retrogene
retro_dord_704,
Echinops telfairi ENSETEG00000004185 ortholog_one2one 1 retrogene
retro_etel_1953,
Gorilla gorilla ENSGGOG00000012415 ortholog_one2one 1 retrogene
retro_ggor_1557,
Myotis lucifugus ENSMLUG00000015833 ortholog_one2many 2 retrogenes
retro_mluc_129, retro_mluc_236,
Macaca mulatta ENSMMUG00000020474 ortholog_one2one 1 retrogene
retro_mmul_1674,
Mus musculus ENSMUSG00000031783 ortholog_one2one 1 retrogene
retro_mmus_1723,
Nomascus leucogenys ENSNLEG00000003034 ortholog_one2one 1 retrogene
retro_nleu_1431,
Otolemur garnettii ENSOGAG00000016866 ortholog_one2many 1 retrogene
retro_ogar_3361,
Ochotona princeps ENSOPRG00000006979 ortholog_one2one 1 retrogene
retro_opri_445,
Pongo abelii ENSPPYG00000007390 ortholog_one2one 1 retrogene
retro_pabe_1839,
Pan troglodytes ENSPTRG00000008157 ortholog_one2one 1 retrogene
retro_ptro_1448,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2496 77.35 65.45
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Download FASTA sequences of all ENSG00000102978 retrocopies