Parental gene:

ENSMODG00000014779

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:1:528427871..528432556(+)


>ENSMODG00000014779
ATGAACAGCTTTAGCAATGATGAATTTGACTTCAATTTCCTTGATGAAGGCTTTACTGCTAAGGATATTTTGGACCAGAA
AATTAATGAAGTTTCTTCTTCTGATGATAAAGATGCCTTCTATGTTGCTGACCTCGGTGACATCCTAAAGAAACATCTGA
GATGGTACAAAGCTCTTCCTCGAGTAACTCCTTTTTATGCTGTTAAATGTAATGACAGCAGAGCTATATTGAAGACACTT
GCTGCAGTAGGAGCAGGATTTGATTGTGCTAGCAAGACTGAAATACAATTAGTACAGAGTCTTGGGGTGCCACCAGAGAG
GATAATCTATGCAAATCCATGCAAACAAGTGTCACAAATTAAGTATGCTGCCAACAATGGAGTACAAATGATGACTTTTG
ATAGTGAAGTAGAGTTAATGAAAGTTGCCAGAGCTCATCCAAAGGCAAAGCTTGTTTTAAGGATTGCCACTGATGACTCC
AAAGCTGTCTGTCGTCTAAGTGTTAAATTTGGTGCCACTCTCAAAACTAGTAGGCTACTCCTTGAGCGGGCAAAGGAACT
GAATATTGATGTTATTGGAGTCAGTTTCCATGTGGGAAGTGGTTGTACTGATCCAGAAACATTTGTCCAAGCAGTCTCTG
ATGCTCGATGTGTCTTTGACATGGGGGCAGAGTTTGGTTTCAACATGTATCTTCTTGATATTGGTGGTGGCTTTCCTGGT
TCTGAAGATGTAAAGCTTAAATTTGAAGAGATCTCAAGTGTAATCAATCCAGCATTGGACAAGTATTTTCCTCCTGACTC
TGGAGTGCGAATCATAGCTGAACCTGGCAGATACTATGTTGCATCAGCTTTCACGCTTGCAGTTAACATCATTGCCAAAA
AACTTGTATTAAAAGAACAGACAGGCTCTGATGATGAAGATGAGGCAAATGACCAGACCTTTATGTACTATGTAAATGAT
GGAGTATATGGATCATTTAATTGTATCCTATTTGATCATGCACATGTTAAACCTCTTCTACAGAAGCGGCCCAAACCAGA
TGAGAAGTATTACTCTTCTAGCATATGGGGACCAACATGTGATGGCCTCGATCGAATTGTCGAACGCTGTGATTTACCAG
AAATGCATGTGGGAGATTGGATGCTGTTTGAAAACATGGGCGCTTATACTGTTGCTGCTGCTTCTACTTTCAATGGATTC
CAGAGACCCACTATCTATTATGTGATGTCTGGGCCAGCATGGCAATGCATGCAACAAATCAAGAACCAAGGCTTTCCAGC
AGAAGTAGAGGATCAGGATATCAACACTTTGCCATTGTCTTGTGCTTGGGAAAGTGGAATGGAACATCACTCAACAACTT
GTACTTCAGCTAGTGTTAATGTATAG

Library Parental gene expression (RPM)
SRP007412_brain 40 .88 RPM
SRP007412_cerebellum 48 .32 RPM
SRP007412_heart 30 .50 RPM
SRP007412_kidney 111 .93 RPM
SRP007412_liver 68 .98 RPM
SRP007412_testis 424 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011415 ortholog_many2many 1 retrogene
retro_amel_414,
Bos taurus ENSBTAG00000004256 ortholog_many2many 1 retrogene
retro_btau_552,
Choloepus hoffmanni ENSCHOG00000010898 ortholog_one2many 2 retrogenes
retro_chof_1618, retro_chof_2111,
Callithrix jacchus ENSCJAG00000006576 ortholog_one2many 2 retrogenes
retro_cjac_3170, retro_cjac_3857,
Dasypus novemcinctus ENSDNOG00000018474 ortholog_many2many 31 retrogenes
retro_dnov_1032, retro_dnov_1128, retro_dnov_1129, retro_dnov_1137, retro_dnov_1212, retro_dnov_1235, retro_dnov_1418, retro_dnov_1434, retro_dnov_1493, retro_dnov_1594, retro_dnov_1595, retro_dnov_1677, retro_dnov_1778, retro_dnov_1810, retro_dnov_1813, retro_dnov_2016, retro_dnov_2027, retro_dnov_2108, retro_dnov_2147, retro_dnov_2180, retro_dnov_2212, retro_dnov_2461, retro_dnov_2551, retro_dnov_2564, retro_dnov_392, retro_dnov_740, retro_dnov_766, retro_dnov_781, retro_dnov_923, retro_dnov_943, retro_dnov_958,
Equus caballus ENSECAG00000022690 ortholog_one2many 2 retrogenes
retro_ecab_1002, retro_ecab_957,
Loxodonta africana ENSLAFG00000005330 ortholog_one2many 2 retrogenes
retro_lafr_218, retro_lafr_850,
Myotis lucifugus ENSMLUG00000010423 ortholog_many2many 1 retrogene
retro_mluc_281,
Macaca mulatta ENSMMUG00000020441 ortholog_many2many 2 retrogenes
retro_mmul_157, retro_mmul_1645,
Mustela putorius furo ENSMPUG00000013321 ortholog_one2many 1 retrogene
retro_mputfur_1272,
Mus musculus ENSMUSG00000011179 ortholog_one2many 12 retrogenes
retro_mmus_2588, retro_mmus_2744, retro_mmus_2745, retro_mmus_2746, retro_mmus_2747, retro_mmus_2834, retro_mmus_2922, retro_mmus_3237, retro_mmus_3677, retro_mmus_503, retro_mmus_912, retro_mmus_984,
Nomascus leucogenys ENSNLEG00000013820 ortholog_one2many 1 retrogene
retro_nleu_1119,
Pongo abelii ENSPPYG00000012654 ortholog_one2many 1 retrogene
retro_pabe_3090,
Ictidomys tridecemlineatus ENSSTOG00000000386 ortholog_many2many 2 retrogenes
retro_itri_1751, retro_itri_801,
Tursiops truncatus ENSTTRG00000004611 ortholog_one2many 3 retrogenes
retro_ttru_1940, retro_ttru_731, retro_ttru_843,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_262 99.57 100.00
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Download FASTA sequences of all ENSMODG00000014779 retrocopies