Parental gene: | ENSMODG00000009896 |
| Aliases: | None |
| Description: | None |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 1:271548705..271569579(-) |
>ENSMODG00000009896
ATGAAGGCTCGATTAAAAGGCGCACAAACAGGTCGGAACCTCCTAAAGAAAAAGTCTGATGCCATGACTCTTCGATTTCG
GCAGATCTTAAAGAAGGTCATTCAGACCAAAGTACTAATGGGTGAAGTGATGCGAGAAGCTGCTTTCTCACTTGCTGAAG
CCAAATTCACAGCTGGCGACTTTAGTGCCACTGTTATTCAGAATGTGAACAAAGCTCAAGTGAAGATTAGAACAAAGAAA
GATAATGTAGCAGGTGTTACCTTGCCAGTATTTGAACATTACCATGAAGGAACTGACAGTTATGAATTGACTGGTTTGGC
CAGAGGTGGGGAACAAGTGACCAAACTGAAGAAGAACTATGGCAAAGCAGTAGAGCTGCTAGTGGAACTAGCATCACTCC
AGACTTCATTTATTACGCTGGATGAGGCCATTAAAATAACAAACAGACGGGTGAATGCCATTGAGCATGTGATCATTCCC
CGGATTGAGCGTACACTTAATTACATTGTCACAGAACTGGATGAGCGAGAACGTGAAGAGTTTTACAGGTTAAAGAAAAT
ACAGGAGAAGAAGAAGAGTGTCAAAGAAAAATTAGAGAAGGAGATATCCTGCCTGAAAGCATCTGGAGAATTGCCAGAGC
CTGCTAATCTGCTGGCAATAGAAAAGGATGAAGATCTTCTATTTGAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 139 .70 RPM |
| SRP007412_cerebellum | 157 .35 RPM |
| SRP007412_heart | 78 .94 RPM |
| SRP007412_kidney | 123 .78 RPM |
| SRP007412_liver | 76 .03 RPM |
| SRP007412_testis | 623 .68 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000008240 | ortholog_many2many | 1 retrogene | |
| Bos taurus | ENSBTAG00000016309 | ortholog_one2many | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000016369 | ortholog_one2many | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000003733 | ortholog_many2many | 5 retrogenes | |
| Cavia porcellus | ENSCPOG00000009085 | ortholog_many2many | 1 retrogene | |
| Felis catus | ENSFCAG00000011078 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000006244 | ortholog_many2many | 5 retrogenes | |
| Macaca mulatta | ENSMMUG00000021418 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000007002 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000015052 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000002288 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000027710 | ortholog_one2many | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000005696 | ortholog_one2many | 1 retrogene | |
| Drosophila melanogaster | FBgn0040377 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_390 | 84.77 | 64.63 | Please wait, loading  |
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| 2. | retro_mdom_594 | 57.22 | 81.22 | Please wait, loading |
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| 3. | retro_mdom_1196 | 94.89 | 59.83 | Please wait, loading |
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| 4. | retro_mdom_1522 | 78.36 | 58.08 | Please wait, loading |
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| 5. | retro_mdom_1730 | 88.73 | 89.08 | Please wait, loading |
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Download FASTA sequences of all ENSMODG00000009896 retrocopies