Parental gene:

NFYB, ENSMMUG00000022570

Aliases:None
Description:nuclear transcription factor Y subunit beta [Source:RefSeq peptide;Acc:NP_001244649]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:11:105239847..105256868(-)


>ENSMMUG00000022570
ATGACAATGGATGGTGACAGTTCTACAACAGATGCTTCTCAACTAGGAATCTCTGCAGACTATATTGGAGGAAGTCATTA
TGTTATACAGCCTCATGATGATACTGAGGACAGCATGAATGATCATGAGGACACAAATGGTTCAAAAGAAAGTTTCAGAG
AACAAGATATATATCTTCCAATAGCAAATGTGGCTAGGATAATGAAAAATGCCATACCTCAAACGGGAAAGATTGCAAAA
GATGCCAAAGAATGTGTTCAAGAGTGTGTGAGTGAGTTCATCAGCTTTATAACATCTGAGGCAAGCGAAAGGTGCCATCA
AGAGAAACGGAAAACAATCAATGGAGAAGATATTCTCTTTGCTATGTCTACCTTAGGCTTTGACAGTTATGTGGAACCTC
TGAAATTATACCTTCAGAAATTCAGAGAGGCTATGAAAGGAGAAAAGGGAATTGGTGGAGCAGTCACAGCTACAGATGGA
CTAAGTGAAGAGCTTACAGAGGAGGCATTTACTAACCAGTTACCAGCTGGCTTAATAACCACAGACGGTCAACAACAAAA
TGTTATGGTTTACACAACATCATATCAACAGATTTCTGGTGTTCAGCAAATTCAGTTTTCATGA

Library Parental gene expression (RPM)
SRP007412_brain 22 .52 RPM
SRP007412_brain_prefrontal_cortex 11 .66 RPM
SRP007412_cerebellum 14 .92 RPM
SRP007412_heart 6 .71 RPM
SRP007412_kidney 12 .68 RPM
SRP007412_liver 7 .36 RPM
SRP007412_testis 7 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006686 ortholog_one2one 1 retrogene
retro_amel_940,
Bos taurus ENSBTAG00000030744 ortholog_one2one 1 retrogene
retro_btau_1681,
Canis familiaris ENSCAFG00000029177 ortholog_one2one 1 retrogene
retro_cfam_1677,
Callithrix jacchus ENSCJAG00000014610 ortholog_one2one 1 retrogene
retro_cjac_1133,
Cavia porcellus ENSCPOG00000003213 ortholog_one2one 1 retrogene
retro_cpor_901,
Felis catus ENSFCAG00000026471 ortholog_one2one 1 retrogene
retro_fcat_207,
Homo sapiens ENSG00000120837 ortholog_one2one 2 retrogenes
retro_hsap_2827, retro_hsap_4047,
Gorilla gorilla ENSGGOG00000008866 ortholog_one2one 1 retrogene
retro_ggor_2714,
Myotis lucifugus ENSMLUG00000005468 ortholog_one2one 1 retrogene
retro_mluc_1764,
Mustela putorius furo ENSMPUG00000012064 ortholog_one2one 3 retrogenes
retro_mputfur_1531, retro_mputfur_1563, retro_mputfur_1567,
Nomascus leucogenys ENSNLEG00000006543 ortholog_one2one 2 retrogenes
retro_nleu_1203, retro_nleu_2061,
Oryctolagus cuniculus ENSOCUG00000004415 ortholog_one2one 4 retrogenes
retro_ocun_1334, retro_ocun_1816, retro_ocun_1824, retro_ocun_1845,
Ochotona princeps ENSOPRG00000008117 ortholog_one2one 2 retrogenes
retro_opri_36, retro_opri_657,
Ictidomys tridecemlineatus ENSSTOG00000005279 ortholog_one2one 1 retrogene
retro_itri_1851,
Tupaia belangeri ENSTBEG00000005731 ortholog_one2one 1 retrogene
retro_tbel_4360,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1433 97.27 53.14
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2. retro_mmul_2119 50.34 70.53
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3. retro_mmul_2335 65.55 99.52
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Download FASTA sequences of all ENSMMUG00000022570 retrocopies