Parental gene:

DDX6, ENSMMUG00000018651

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:14:117150051..117189011(-)


>ENSMMUG00000018651
ATGAGCACGGCCAGAACAGAGAACCCTGTTATAATGGGTCTGTCCAGTCAAAATGGTCAGCTGAGAGGCCCTGTGAAACC
CACTGGTGGCCCTGGAGGAGGGGGCACACAGACACAGCAACAGATGAACCAGCTGAAAAACACCAACACAATCAATAATG
GCACTCAGCAGCAAGCACAGAGTATGACCACCACTATTAAACCTGGTGATGACTGGAAAAAGACTTTAAAACTCCCTCCA
AAGGATCTTAGAATCAAAACTTCGTACAGCTGTCCCTCGGTATCTGGAGGGAATTGGTTTCAGGACCATAACACCGCTGC
CACCCTCCTCCTCCAACCCAGTAAGATAGATATTCAGGCTATACCTAAGGTGGTAGATGAGGAGAGCATTCCCATTGCTT
TATCTGGTAGGGATATCTTAGCTAGAGCAAAAAATGGAACAGGCAAGAGCGGTGCCTACCTCATTCCCTTACTTGAACGG
CTAGACCTGAAGAAGGACAATATACAAGCAATGGTGATTGTTCCCACTAGAGAACTTGCTCTACAGGTCAGTCAAATTTG
CATCCAGGTCAGCAAACACATGGGAGGGGCCAAAGTGATGGCAACCACAGGAGGAACCAATTTACGAGATGACATAATGA
GGCTTGATGATACAGTGCACGTGGTGATTGCTACCCCTGGGAGAATCCTGGATCTTATTAAGAAGGGAGTAGCAAAGGTT
GATCATGTCCAGATGATAGTGTTGGATGAGGCAGATAAGTTGCTGTCACAGGATTTTGTGCAGATAATGGAGGATATTAT
TCTCACGCTACCTAAAAACAGGCAGATTTTACTATATTCCGCTACTTTCCCTCTTAGTGTACAGAAGTTCATGAATTCCC
ATTTGCAGAAACCCTATGAGATTAACCTGATGGAGGAACTAACTCTGAAGGGAGTAACCCAGTACTACGCATATGTAACT
GAGCGCCAAAAAGTACACTGCCTCAACACACTTTTCTCCAGGCTTCAGATAAACCAGTCGATCATTTTCTGTAACTCCTC
TCAGCGAGTTGAATTACTAGCCAAGAAGATTTCTCAACTGGGTTATTCTTGCTTCTATATTCATGCTAAAATGAGGCAGG
AACATCGAAATCGTGTATTTCATGATTTCCGAAATGGCTTATGCCGCAATCTTGTTTGCACTGATCTGTTTACCCGAGGT
ATTGATATACAAGCTGTGAATGTGGTAATAAACTTTGATTTCCCAAAGCTGGCCGAGACCTATCTCCATCGTATTGGAAG
ATCAGGTCGCTTTGGTCATCTTGGCTTAGCCATCAACTTGATCACATATGATGATCGCTTCAACCTGAAAAGTATTGAGG
AGCAGCTGGGAACAGAAATTAAACCTATTCCAAGCAACATTGATAAGAGCCTGTATGTGGCAGAATACCACAGCGAGCCT
GTAGAAGATGAGAAACCTTAA

Library Parental gene expression (RPM)
SRP007412_brain 47 .17 RPM
SRP007412_brain_prefrontal_cortex 33 .40 RPM
SRP007412_cerebellum 56 .31 RPM
SRP007412_heart 14 .54 RPM
SRP007412_kidney 23 .71 RPM
SRP007412_liver 8 .15 RPM
SRP007412_testis 27 .21 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000012442 ortholog_one2one 1 retrogene
retro_cfam_1347,
Callithrix jacchus ENSCJAG00000013591 ortholog_one2one 3 retrogenes
retro_cjac_1427, retro_cjac_1924, retro_cjac_379,
Gorilla gorilla ENSGGOG00000016751 ortholog_one2one 1 retrogene
retro_ggor_955,
Mus musculus ENSMUSG00000032097 ortholog_one2one 1 retrogene
retro_mmus_1896,
Nomascus leucogenys ENSNLEG00000007372 ortholog_one2one 1 retrogene
retro_nleu_695,
Otolemur garnettii ENSOGAG00000007978 ortholog_one2one 1 retrogene
retro_ogar_2861,
Pongo abelii ENSPPYG00000003942 ortholog_one2one 2 retrogenes
retro_pabe_1018, retro_pabe_2941,
Pan troglodytes ENSPTRG00000004353 ortholog_one2one 2 retrogenes
retro_ptro_2424, retro_ptro_838,
Rattus norvegicus ENSRNOG00000012453 ortholog_one2one 4 retrogenes
retro_rnor_2546, retro_rnor_2613, retro_rnor_900, retro_rnor_901,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1300 90.08 51.44
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2. retro_mmul_1826 71.26 69.75
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Download FASTA sequences of all ENSMMUG00000018651 retrocopies