Parental gene:

DDX6, ENSCAFG00000012442

Aliases:None
Description:DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:HGNC Symbol;Acc:2747]
Organism:Dog (Canis familiaris)
Coordinates:5:15005330..15030790(+)


>ENSCAFG00000012442
ATGAGCACGGCCAGAACAGAGAACCCTGTTATAATGGGTCTTTCCAGTCAAAATGGTCAGCTGAGGGGCCCTGTGAAGCC
CAGTGGTGGCCCCGGAGGAGGGGGCACACAGACACAGCAACAGATGAACCAGCTGAAAAATACCAACACAATCAATAATG
GCACTCAGCAGCAAGCACAGAGTATGACCACCACTATTAAACCTGGTGATGACTGGAAAAAGACTTTAAAACTCCCTCCA
AAGGATCTAAGAATCAAAACTTCGGATGTGACCTCCACAAAAGGAAATGAGTTTGAAGATTACTGTTTGAAACGGGAGTT
ACTGATGGGAATTTTTGAAATGGGCTGGGAAAAGCCATCTCCTATTCAGGAGGAGAGCATTCCCATTGCTTTATCTGGTA
GGGATATCTTAGCTAGAGCAAAAAATGGAACAGGCAAGAGCGGTGCCTACCTCATTCCCTTACTTGAACGGCTAGACCTG
AAGAAGGACAATATACAAGCAATGGTGATTGTTCCCACTAGAGAACTTGCTCTACAGGTCAGTCAAATTTGCATCCAGGT
CAGCAAGCACATGGGAGGGGCCAAAGTGATGGCAACCACAGGAGGAACCAATTTACGGGATGACATAATGAGGCTTGATG
ACACAGTGCACGTGGTGATAGCTACCCCTGGAAGAATCCTGGATCTTATCAAGAAAGGAGTAGCAAAAGTTGATCATGTC
CAGATGATAGTATTGGATGAGGCAGATAAGTTGCTGTCACAGGATTTTGTGCAGATAATGGAGGATATTATTCTCACGCT
ACCTAAAAACAGGCAGATTTTATTATATTCCGCTACTTTCCCTCTTAGTGTACAGAAGTTCATGAATTCCCATTTGCAGA
AACCCTATGAGATTAACCTGATGGAGGAACTAACTTTGAAGGGAGTAACCCAGTACTACGCCTATGTAACTGAGCGCCAA
AAAGTACACTGCCTCAACACACTTTTTTCCAGGCTTCAGATAAACCAGTCGATCATTTTCTGTAACTCCTCTCAGCGAGT
TGAATTGCTAGCCAAGAAGATTTCTCAACTGGGTTATTCTTGCTTCTATATCCATGCTAAAATGAGGCAGGAACATCGAA
ATCGTGTATTTCATGATTTCCGAAATGGCTTATGCCGCAATCTTGTTTGCACTGATTTGTTTACCCGAGGTATTGATATA
CAAGCTGTGAATGTGGTAATAAACTTTGACTTCCCAAAGCTGGCAGAGACCTATCTCCATCGTATTGGAAGATCAGGTCG
CTTTGGTCATCTTGGCTTAGCCATCAACTTGATCACATATGATGATCGCTTCAACCTGAAAAGTATTGAGGAGCAGCTGG
GAACAGAAATTAAACCGATCCCAAGCAACATTGACAAGAGCCTGTATGTGGCAGAATACCACAGCGAGCCCGTGGAGGAT
GAGAAGCCCTAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 40 .70 RPM
SRP017611_brain 33 .74 RPM
SRP017611_kidney 18 .69 RPM
SRP017611_liver 11 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000013591 ortholog_one2one 3 retrogenes
retro_cjac_1427, retro_cjac_1924, retro_cjac_379,
Gorilla gorilla ENSGGOG00000016751 ortholog_one2one 1 retrogene
retro_ggor_955,
Macaca mulatta ENSMMUG00000018651 ortholog_one2one 2 retrogenes
retro_mmul_1300, retro_mmul_1826,
Mus musculus ENSMUSG00000032097 ortholog_one2one 1 retrogene
retro_mmus_1896,
Nomascus leucogenys ENSNLEG00000007372 ortholog_one2one 1 retrogene
retro_nleu_695,
Otolemur garnettii ENSOGAG00000007978 ortholog_one2one 1 retrogene
retro_ogar_2861,
Pongo abelii ENSPPYG00000003942 ortholog_one2one 2 retrogenes
retro_pabe_1018, retro_pabe_2941,
Pan troglodytes ENSPTRG00000004353 ortholog_one2one 2 retrogenes
retro_ptro_2424, retro_ptro_838,
Rattus norvegicus ENSRNOG00000012453 ortholog_one2one 4 retrogenes
retro_rnor_2546, retro_rnor_2613, retro_rnor_900, retro_rnor_901,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1347 97.11 100.00
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Download FASTA sequences of all ENSCAFG00000012442 retrocopies