Parental gene:

DHFR, ENSMMUG00000018283

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:6:76816569..76841150(-)


>ENSMMUG00000018283
ATGGCAGCCCGGGAACAGGGCCCTGCCGGGAGCGCGAGCCCGCGGCCGCAGTTCCCAGGCGTCTGCGGGCGCGAGCCCGC
CGTGACCCTGCCGTGCGCCGGGGCGGGGGGCGGGGCCTCGCCTGCACAAATAGGAACGAGAGGGCGGGGCGGCCACAATT
TCGCGCCAATCTTGACCGCGCGTTCTGTTTTAACTAGCGGGCTCGGAGGTGCTCCAGCTGCTGTCATGGTTAGTTCGCTA
AACTGCATCGTCGCTGTGTCCCAGAACATGGGCATCGGCAAGAACGGGGACCTGCCCTGGCCGCCGCTCAGGAATGAATT
CAGATATTTCCAGAGAATGACCACAACCTCTTCAGTAGAAGGTAAACAGAATCTGGTGATTATGGGTAAGAAGACTTGGT
TCTCCATTCCTGAGAAGAATCGACCTTTAAAGGGTAGAATTAATTTAGTTCTCAGCAGAGAACTCAAGGAACCTCCACAA
GGAGCTCATTTTCTTGCCAGAAGTCTGGATGATGCCTTAAAACTTACTGAACAACCAGAATTAGCAAATAAAGTAGACAT
GATTTGGATAGTTGGTGGCAGTTCTGTTTATAAGGAAGCCATGAATCACCCAGGCCATCTTAAACTATTTGTGACAAGGA
TCATGCAAGACTTTGAAAGTGACACCTTTCTTCCAGAAATTGATTTGGAGAAATATAAACTTCTACCAGAATACCCAGGT
GTTCTCTCTGATGTCCAAGAGGAGAAAGGCATTAAGTACAAATTTGAAGTATATGAGAAGAATGATTAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .67 RPM
SRP007412_brain_prefrontal_cortex 1 .19 RPM
SRP007412_cerebellum 0 .13 RPM
SRP007412_heart 0 .35 RPM
SRP007412_kidney 0 .82 RPM
SRP007412_liver 3 .21 RPM
SRP007412_testis 0 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015750 ortholog_one2many 2 retrogenes
retro_amel_218, retro_amel_842,
Bos taurus ENSBTAG00000007681 ortholog_one2many 1 retrogene
retro_btau_351,
Callithrix jacchus ENSCJAG00000019556 ortholog_many2many 4 retrogenes
retro_cjac_2017, retro_cjac_2298, retro_cjac_2446, retro_cjac_531,
Equus caballus ENSECAG00000026827 ortholog_one2many 1 retrogene
retro_ecab_513,
Felis catus ENSFCAG00000026745 ortholog_one2many 3 retrogenes
retro_fcat_579, retro_fcat_705, retro_fcat_841,
Homo sapiens ENSG00000228716 ortholog_many2many 4 retrogenes
retro_hsap_1927, retro_hsap_2119, retro_hsap_3602, retro_hsap_6,
Gorilla gorilla ENSGGOG00000022366 ortholog_one2many 2 retrogenes
retro_ggor_1959, retro_ggor_2429,
Myotis lucifugus ENSMLUG00000012200 ortholog_one2many 2 retrogenes
retro_mluc_1109, retro_mluc_2577,
Monodelphis domestica ENSMODG00000024860 ortholog_one2many 3 retrogenes
retro_mdom_1685, retro_mdom_604, retro_mdom_703,
Mustela putorius furo ENSMPUG00000008704 ortholog_one2many 1 retrogene
retro_mputfur_1107,
Mus musculus ENSMUSG00000021707 ortholog_one2many 1 retrogene
retro_mmus_3326,
Nomascus leucogenys ENSNLEG00000012989 ortholog_one2many 3 retrogenes
retro_nleu_1193, retro_nleu_2314, retro_nleu_2631,
Oryctolagus cuniculus ENSOCUG00000005127 ortholog_one2many 3 retrogenes
retro_ocun_1351, retro_ocun_1640, retro_ocun_650,
Otolemur garnettii ENSOGAG00000025320 ortholog_many2many 1 retrogene
retro_ogar_222,
Pongo abelii ENSPPYG00000015600 ortholog_many2many 2 retrogenes
retro_pabe_2959, retro_pabe_41,
Pan troglodytes ENSPTRG00000017042 ortholog_many2many 3 retrogenes
retro_ptro_109, retro_ptro_1551, retro_ptro_2988,
Rattus norvegicus ENSRNOG00000013521 ortholog_one2many 1 retrogene
retro_rnor_2030,
Sus scrofa ENSSSCG00000014125 ortholog_one2many 2 retrogenes
retro_sscr_104, retro_sscr_1131,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_82 98.93 71.37
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_mmul_425 97.63 80.15
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_mmul_692 83.02 79.77
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_mmul_693 83.15 69.08
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_mmul_695 80.12 64.12
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_mmul_700 80.75 79.77
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_mmul_701 84.91 79.77
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_mmul_704 84.43 79.77
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_mmul_738 83.57 79.77
Please wait, loading
Please wait, loading
Please wait, loading
10. retro_mmul_760 82.16 79.77
Please wait, loading
Please wait, loading
Please wait, loading
11. retro_mmul_768 81.99 79.39
Please wait, loading
Please wait, loading
Please wait, loading
12. retro_mmul_994 95.71 80.15
Please wait, loading
Please wait, loading
Please wait, loading
13. retro_mmul_1496 85.31 66.79
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMMUG00000018283 retrocopies