Parental gene:

MMU.4156, ENSMMUG00000017375

Aliases:None
Description:UMP-CMP kinase [Source:RefSeq peptide;Acc:NP_001180547]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:1:50153990..50198871(+)


>ENSMMUG00000017375
ATGCTGAGCCGCTGCCGCAGCCGACTGCTCCACGTCCTGGGCCTTAGCTTCCTGCTGCAGACCCGCCGGCCGATTCTCTT
CTGCCCTCCCCGTCTCATGAAGCCGCTGGTAGTGTTCGTCCTCGGCGGCCCCGGCGCCGGCAAGGGGACCCAGTGCGCCC
GCATCGTCGAGAAATATGGCTACACACACCTTTCTGCAGGAGAGCTGCTTCGTGATGAAAGGAAGAACCCAGATTCACAG
TATGGTGAACTTATTGAAAAGTACATTAAAGAAGGAAAGATTGTACCAGTTGAGATAACCATCAGTTTATTAAAGAGGGA
AATGGATCAGACAATGGCTGCCAATGCTCAGAAGAATAAATTCTTGATTGATGGGTTTCCAAGAAATCAAGACAACCTTC
AAGGTTGGAACAAGACCATGGATGGGAAGGCAGATGTATCTTTCGTTCTGTTTTTTGACTGTAATAATGAGATCTGTATT
GAACGATGTCTTGAGAGGGGAAAGAGTAGTGGTAGGAGTGATGACAACAGAGAGAGCTTGGAAAAGAGAATTCAGACATA
CCTTCAGTCAACAAAGCCAATTATTGACTTATATGAAGAAATGGGGAAAGTCAAGAAAATAGATGCTTCTAAATCTGTTG
ATGAAGTTTTTGATGAAGTTGTGCAGATTTTTGACAAGGAAGGCTAA

Library Parental gene expression (RPM)
SRP007412_brain 19 .72 RPM
SRP007412_brain_prefrontal_cortex 15 .31 RPM
SRP007412_cerebellum 23 .38 RPM
SRP007412_heart 14 .90 RPM
SRP007412_kidney 21 .71 RPM
SRP007412_liver 14 .92 RPM
SRP007412_testis 4 .22 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000012 ortholog_one2many 2 retrogenes
retro_amel_1074, retro_amel_1711,
Canis familiaris ENSCAFG00000004030 possible_ortholog 1 retrogene
retro_cfam_1729,
Choloepus hoffmanni ENSCHOG00000004014 ortholog_many2many 2 retrogenes
retro_chof_609, retro_chof_840,
Callithrix jacchus ENSCJAG00000021250 ortholog_one2many 2 retrogenes
retro_cjac_2652, retro_cjac_2992,
Cavia porcellus ENSCPOG00000014747 possible_ortholog 4 retrogenes
retro_cpor_1070, retro_cpor_1295, retro_cpor_417, retro_cpor_799,
Felis catus ENSFCAG00000025426 ortholog_one2many 1 retrogene
retro_fcat_1259,
Mustela putorius furo ENSMPUG00000012394 possible_ortholog 1 retrogene
retro_mputfur_1061,
Mus musculus ENSMUSG00000028719 possible_ortholog 1 retrogene
retro_mmus_2576,
Otolemur garnettii ENSOGAG00000026904 ortholog_one2many 2 retrogenes
retro_ogar_1589, retro_ogar_3204,
Pongo abelii ENSPPYG00000001380 ortholog_one2many 1 retrogene
retro_pabe_1369,
Rattus norvegicus ENSRNOG00000007775 possible_ortholog 1 retrogene
retro_rnor_1940,
Sorex araneus ENSSARG00000009745 ortholog_one2many 2 retrogenes
retro_sara_199, retro_sara_294,
Sus scrofa ENSSSCG00000003885 possible_ortholog 1 retrogene
retro_sscr_454,
Tupaia belangeri ENSTBEG00000017494 ortholog_one2many 2 retrogenes
retro_tbel_3597, retro_tbel_691,
Tarsius syrichta ENSTSYG00000007511 ortholog_one2many 1 retrogene
retro_tsyr_319,
Vicugna pacos ENSVPAG00000004127 ortholog_one2many 2 retrogenes
retro_vpac_345, retro_vpac_373,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_66 98.68 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_mmul_1572 68.85 51.75
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMMUG00000017375 retrocopies