Parental gene:

PRDX2, ENSG00000167815

Aliases:PRDX2, HEL-S-2a, NKEF-B, NKEFB, PRP, PRX2, PRXII, PTX1, TDPX1, TPX1, TSA
Description:peroxiredoxin 2 [Source:HGNC Symbol;Acc:9353]
Organism:Human (Homo sapiens)
Coordinates:19:12907633..12912694(-)


>ENSG00000167815
ATGGCCTCCGGTAACGCGCGCATCGGAAAGCCAGCCCCTGACTTCAAGGCCACAGCGGTGGTTGATGGCGCCTTCAAAGA
GGTGAAGCTGTCGGACTACAAAGGGAAGTACGTGGTCCTCTTTTTCTACCCTCTGGACTTCACTTTTGTGTGCCCCACCG
AGATCATCGCGTTCAGCAACCGTGCAGAGGACTTCCGCAAGCTGGGCTGTGAAGTGCTGGGCGTCTCGGTGGACTCTCAG
TTCACCCACCTGGCTTGGATCAACACCCCCCGGAAAGAGGGAGGCTTGGGCCCCCTGAACATCCCCCTGCTTGCTGACGT
GACCAGACGCTTGTCTGAGGATTACGGCGTGCTGAAAACAGATGAGGGCATTGCCTACAGGGGCCTCTTTATCATCGATG
GCAAGGGTGTCCTTCGCCAGATCACTGTTAATGATTTGCCTGTGGGACGCTCCGTGGATGAGGCTCTGCGGCTGGTCCAG
GCCTTCCAGTACACAGACGAGCATGGGGAAGTTTGTCCCGCTGGCTGGAAGCCTGGCAGTGACACGATTAAGCCCAACGT
GGATGACAGCAAGGAATATTTCTCCAAACACAATTAG

Library Parental gene expression (RPM)
bodymap2_adipose 61 .34 RPM
bodymap2_adrenal 72 .20 RPM
bodymap2_brain 101 .12 RPM
bodymap2_breast 135 .78 RPM
bodymap2_colon 64 .45 RPM
bodymap2_heart 129 .69 RPM
bodymap2_kidney 89 .28 RPM
bodymap2_liver 69 .77 RPM
bodymap2_lung 46 .91 RPM
bodymap2_lymph_node 59 .66 RPM
bodymap2_ovary 103 .79 RPM
bodymap2_prostate 85 .16 RPM
bodymap2_skeletal_muscle 83 .63 RPM
bodymap2_testis 57 .92 RPM
bodymap2_thyroid 86 .42 RPM
bodymap2_white_blood_cells 25 .79 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012307 ortholog_one2many 3 retrogenes
retro_amel_1188, retro_amel_1710, retro_amel_55,
Canis familiaris ENSCAFG00000017163 ortholog_one2one 3 retrogenes
retro_cfam_1603, retro_cfam_1624, retro_cfam_1739,
Ciona intestinalis ENSCING00000003002 ortholog_one2many 1 retrogene
retro_cint_8,
Callithrix jacchus ENSCJAG00000004882 ortholog_one2one 4 retrogenes
retro_cjac_1269, retro_cjac_1795, retro_cjac_2356, retro_cjac_2392,
Dipodomys ordii ENSDORG00000009005 ortholog_one2one 1 retrogene
retro_dord_176,
Felis catus ENSFCAG00000000473 ortholog_one2one 1 retrogene
retro_fcat_1755,
Homo sapiens ENSG00000117450 within_species_paralog 1 retrogene
retro_hsap_4230,
Homo sapiens ENSG00000123131 within_species_paralog 1 retrogene
retro_hsap_3165,
Homo sapiens ENSG00000165672 within_species_paralog 3 retrogenes
retro_hsap_1253, retro_hsap_2587, retro_hsap_2653,
Gorilla gorilla ENSGGOG00000025089 ortholog_one2one 3 retrogenes
retro_ggor_2366, retro_ggor_2833, retro_ggor_923,
Macaca mulatta ENSMMUG00000005689 ortholog_one2one 2 retrogenes
retro_mmul_1780, retro_mmul_2061,
Monodelphis domestica ENSMODG00000006978 ortholog_one2one 1 retrogene
retro_mdom_1770,
Mustela putorius furo ENSMPUG00000004591 ortholog_one2one 2 retrogenes
retro_mputfur_28, retro_mputfur_660,
Mus musculus ENSMUSG00000005161 ortholog_one2many 2 retrogenes
retro_mmus_2403, retro_mmus_472,
Nomascus leucogenys ENSNLEG00000012800 ortholog_one2one 2 retrogenes
retro_nleu_2110, retro_nleu_2883,
Otolemur garnettii ENSOGAG00000024998 ortholog_one2many 2 retrogenes
retro_ogar_1993, retro_ogar_244,
Pongo abelii ENSPPYG00000009607 ortholog_one2one 3 retrogenes
retro_pabe_2711, retro_pabe_2892, retro_pabe_988,
Pan troglodytes ENSPTRG00000010541 ortholog_one2one 3 retrogenes
retro_ptro_2217, retro_ptro_2372, retro_ptro_812,
Rattus norvegicus ENSRNOG00000003520 ortholog_one2one 2 retrogenes
retro_rnor_2288, retro_rnor_497,
Sorex araneus ENSSARG00000000146 ortholog_one2one 1 retrogene
retro_sara_96,
Sarcophilus harrisii ENSSHAG00000015596 ortholog_one2one 1 retrogene
retro_shar_305,
Sus scrofa ENSSSCG00000013736 ortholog_one2one 2 retrogenes
retro_sscr_155, retro_sscr_962,
Ictidomys tridecemlineatus ENSSTOG00000025862 ortholog_one2one 1 retrogene
retro_itri_842,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1184 87.85 78.68
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2. retro_hsap_3278 68.98 91.41
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3. retro_hsap_3500 83.24 89.90
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Download FASTA sequences of all ENSG00000167815 retrocopies