Parental gene:

DCAF13, ENSG00000164934

Aliases:DCAF13, GM83, WDSOF1
Description:DDB1 and CUL4 associated factor 13 [Source:HGNC Symbol;Acc:24535]
Organism:Human (Homo sapiens)
Coordinates:8:104426941..104455681(+)


>ENSG00000164934
ATGCAGTGGCCGCCACCGTGGCGACGGTCGCCCCTTGTGAGCGCAACCCCACCTCCGGGACCAACGAGAGGACTCTTATG
CCCAAGGCGCGTGAGCGAAGCCGGAGACTCTAGTACTGAGGGGGCAAGAACGGGGCACAGACACTACGTCACGCCGGCGG
AAAGCGCGATGGAGGGGAGGTCCCAGCCTCTCCCGAGTCTCCGCCCTGCCTCGCCCACAAATGCTCCAGCCCACGGACGC
GGAAGCGACTGCACAGCTAAAGAACCGCCCCTTGCTAACGTTTGCCGGCAAAACTACGGAGCGGCGCAGGATCCAGTTGA
GCCAGCAGGCCGCCGCTCCGCGAGTCACGTGACTGGAAGTAGTCTGGGAAAAGCGGAAGTCGCCTGTGGGAGGAGGTGGC
GGTGGGCGGAACTCCTAGCGGACACCTCGTGGAGTCCGGCCGGAAGAGCAACCGAGATGAAGGTGAAGATGCTGAGCCGG
AATCCGGACAATTATGTCCGCGAAACCAAGTTGGACTTACAGAGAGTTCCAAGAAACTATGATCCTGCTTTACATCCTTT
TGAGGTCCCACGAGAATATATAAGAGCTTTAAATGCTACCAAACTGGAACGAGTATTTGCAAAACCATTCCTTGCTTCGC
TGGATGGTCACCGTGATGGAGTCAATTGCTTGGCAAAGCATCCAGAGAAGCTGGCTACTGTCCTTTCTGGGGCGTGTGAT
GGAGAGGTTAGAATTTGGAATCTAACTCAGCGGAATTGTATCCGTACAATACAAGCACATGAAGGCTTTGTACGAGGAAT
ATGTACTCGCTTTTGTGGGACTTCTTTTTTCACTGTTGGTGATGACAAAACTGTGAAGCAGTGGAAAATGGATGGGCCAG
GCTATGGAGACGAGGAAGAGCCATTACATACAATATTAGGAAAGACAGTGTATACTGGGATTGATCATCACTGGAAAGAA
GCTGTTTTTGCCACATGTGGACAGCAAGTAGACATTTGGGATGAACAAAGAACTAATCCTATATGTTCAATGACCTGGGG
ATTTGACAGTATAAGTAGTGTTAAATTTAACCCAATTGAGACATTTCTCTTGGGAAGTTGTGCATCTGACAGGAATATAG
TACTGTACGATATGAGGCAAGCTACTCCTTTGAAAAAGGTTATCTTAGATATGAGAACAAATACAATCTGTTGGAACCCT
ATGGAAGCTTTCATTTTTACAGCAGCAAATGAAGATTATAACTTATATACTTTTGATATGCGTGCACTGGACACTCCTGT
AATGGTCCATATGGATCATGTATCTGCAGTGCTTGATGTGGATTACTCTCCCACTGGGAAGGAGTTTGTGTCTGCTAGTT
TCGATAAATCTATTCGAATCTTTCCTGTAGACAAAAGTCGAAGCAGGGAGGTATATCATACAAAGAGAATGCAACATGTT
ATCTGTGTAAAATGGACTTCTGACAGCAAGTATATTATGTGTGGATCTGATGAAATGAACATTCGCCTGTGGAAAGCTAA
TGCTTCTGAAAAATTGGGTGTGCTTACATCACGAGAAAAAGCAGCCAAGGATTATAACCAGAAATTGAAGGAGAAATTTC
AGCATTATCCTCATATAAAACGTATAGCTCGTCATCGACATCTACCAAAATCTATCTATAGCCAGATTCAGGAACAGCGC
ATCATGAAAGAAGCTCGTCGACGAAAGGAAGTGAATCGTATTAAACACAGCAAGCCTGGATCTGTGCCACTTGTGTCAGA
GAAGAAGAAACACGTAGTGGCAGTTGTAAAATAA

Library Parental gene expression (RPM)
bodymap2_adipose 21 .91 RPM
bodymap2_adrenal 41 .72 RPM
bodymap2_brain 15 .73 RPM
bodymap2_breast 26 .91 RPM
bodymap2_colon 30 .90 RPM
bodymap2_heart 14 .46 RPM
bodymap2_kidney 45 .43 RPM
bodymap2_liver 20 .09 RPM
bodymap2_lung 14 .59 RPM
bodymap2_lymph_node 24 .67 RPM
bodymap2_ovary 46 .57 RPM
bodymap2_prostate 26 .78 RPM
bodymap2_skeletal_muscle 19 .57 RPM
bodymap2_testis 82 .26 RPM
bodymap2_thyroid 36 .83 RPM
bodymap2_white_blood_cells 28 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001595 ortholog_one2one 3 retrogenes
retro_amel_1453, retro_amel_1723, retro_amel_399,
Canis familiaris ENSCAFG00000000663 ortholog_one2one 3 retrogenes
retro_cfam_1309, retro_cfam_1533, retro_cfam_305,
Callithrix jacchus ENSCJAG00000016181 ortholog_one2one 2 retrogenes
retro_cjac_3083, retro_cjac_612,
Felis catus ENSFCAG00000027256 ortholog_one2one 1 retrogene
retro_fcat_1840,
Gorilla gorilla ENSGGOG00000015124 ortholog_one2one 1 retrogene
retro_ggor_1150,
Myotis lucifugus ENSMLUG00000007375 ortholog_one2one 1 retrogene
retro_mluc_2048,
Nomascus leucogenys ENSNLEG00000003791 ortholog_one2one 1 retrogene
retro_nleu_1718,
Otolemur garnettii ENSOGAG00000002277 ortholog_one2one 1 retrogene
retro_ogar_305,
Pongo abelii ENSPPYG00000018809 ortholog_one2one 2 retrogenes
retro_pabe_1249, retro_pabe_3211,
Pan troglodytes ENSPTRG00000020493 ortholog_one2one 1 retrogene
retro_ptro_1017,
Sarcophilus harrisii ENSSHAG00000006588 ortholog_one2one 1 retrogene
retro_shar_507,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1498 86.67 77.72
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Download FASTA sequences of all ENSG00000164934 retrocopies