Parental gene:

DCAF13, ENSAMEG00000001595

Aliases:None
Description:None
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL194681.1:97529..126456(-)


>ENSAMEG00000001595
GCAGCCAAAATGAAGGTGAAGATGCTGAGCCGGAACCCGGACAACTATGTCCGCGAAACCAAGCTGGACTTACAAAGAGT
TCCAAGAAACTATGATCCTACCTTACATCCTTTTGAGGTCCCACGAGAATACATAAGAGCTTTAAATGCTACCAAACTGG
AACGAGTATTTGCAAAACCATTCCTTGCTTCTCTGGATGGTCACCGAGATGGAGTCAATTGCTTGGCAAAGCATCCAAAG
AGCCTGGCTACTGTCCTTTCTGGGGCATGTGATGGAGAGGTTAGAATTTGGAACTTGACTAAACGAAAATGTATCCGTAC
AATACAAGCACATGAAGGTTTTGTAGGAATGTGTACTTGCTTTTGTGGGACTTCTTTTTTTACTGTTGGCGATGACAAAA
CTGTGAAGCAGTGGAAAATGGATGGACCAGGCTATGGAGAAGAGGAGGAACCATTGCATACAATATTAGGAAAGACAGTG
TATACGGGAATTGATCATCATTGGAAAGAAGCTGTTTTTGCCACATGTGGACAGCAGGTAGATATTTGGGATGAACAAAG
AACAAGTCCTATATGTTCAATGACCTGGGGGTTCGACAGTATAAGTAGTGTTAAATTTAACCCAATTGAGACATTTCTCT
TGGGAAGTTGTGCTTCTGACAGGAATATAGTACTATATGATATGAGGCAAGCTACTCCCCTGAAAAAGGTCATCTTAGAT
ATGAGAACAAATACAATTTGTTGGAACCCTATGGAAGCTTTCATTTTTACTGCAGCAAATGAAGATTACAACTTGTATAC
TTTTGATATGCGTGCACTGGACACCCCTGTGATGGTACATATGGATCATGTGTCTGCGGTACTTGATGTGGATTACTCTC
CCACTGGGAAAGAGTTTGTGTCTGCTAGCTTTGATAAATCTACTTGTATCTTTCCTGTGGACAAAAGTAGAAGCAGGGAA
GTCTATCACACAAAGAGAATGCAACATGTTATCTGTGTAAAATGGACTTCTGACAGCAAATATATTATGTGTGGATCTGA
TGAAATGAATATTCATCTATGGAAAGCTAATGCTTCTGAAAAATTGGGTGTGCTTACATCACGAGAAAAAGCAGGCAAAG
ATTATAACCAGAAATTGAAGGAGAAATTTCAACATCATCCTCATATAAAACGCATTGCTCGTCACCGACATCTACCAAAA
TCTATCTACAGCCAGATCCAGGAACAGCGCATCATGAAGGAAGCTCGCCGACGAAAGGAGGTGAATCGTCTCAAACATAG
CAAGCCTGGATCTGTGTCAATTGTGTCAGAGAAGAAGAAACACATAGTGGCCATTGTGAAA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000000663 ortholog_one2one 3 retrogenes
retro_cfam_1309, retro_cfam_1533, retro_cfam_305,
Callithrix jacchus ENSCJAG00000016181 ortholog_one2one 2 retrogenes
retro_cjac_3083, retro_cjac_612,
Felis catus ENSFCAG00000027256 ortholog_one2one 1 retrogene
retro_fcat_1840,
Homo sapiens ENSG00000164934 ortholog_one2one 1 retrogene
retro_hsap_1498,
Gorilla gorilla ENSGGOG00000015124 ortholog_one2one 1 retrogene
retro_ggor_1150,
Myotis lucifugus ENSMLUG00000007375 ortholog_one2one 1 retrogene
retro_mluc_2048,
Nomascus leucogenys ENSNLEG00000003791 ortholog_one2one 1 retrogene
retro_nleu_1718,
Otolemur garnettii ENSOGAG00000002277 ortholog_one2one 1 retrogene
retro_ogar_305,
Pongo abelii ENSPPYG00000018809 ortholog_one2one 2 retrogenes
retro_pabe_1249, retro_pabe_3211,
Pan troglodytes ENSPTRG00000020493 ortholog_one2one 1 retrogene
retro_ptro_1017,
Sarcophilus harrisii ENSSHAG00000006588 ortholog_one2one 1 retrogene
retro_shar_507,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_399 77.41 52.80
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2. retro_amel_1453 80.08 54.81
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3. retro_amel_1723 89.11 55.26
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Download FASTA sequences of all ENSAMEG00000001595 retrocopies