Parental gene:

FYTTD1, ENSG00000122068

Aliases:None
Description:forty-two-three domain containing 1 [Source:HGNC Symbol;Acc:25407]
Organism:Human (Homo sapiens)
Coordinates:3:197464049..197511317(+)


>ENSG00000122068
ATGAACCGGTTTGGTACCCGGTTGGTGGGAGCCACGGCGACTTCTTCGCCGCCGCCGAAGGCCCGCAGCAATGAAAACCT
CGACAAAATAGATATGTCTTTGGATGATATCATCAAGTTGAATCGAAAGGAAGGGAAGAAGCAGAATTTTCCAAGACTAA
ATAGAAGACTCCTCCAGCAAAGTGGTGCCCAGCAATTCAGGATGAGAGTGCGATGGGGAATCCAACAGAATTCTGGTTTT
GGTAAGACTAGTCTGAATCGTAGAGGAAGAGTAATGCCTGGAAAGAGACGTCCTAATGGAGTTATCACTGGCCTTGCAGC
TAGGAAAACGACTGGAATTCGAAAAGGAATTAGTCCTATGAATCGTCCACCTCTAAGTGACAAGAATATAGAACAATATT
TTCCAGTGTTAAAAAGGAAGGCAAACCTTCTGAGACAAAATGAAGGGCAGAGGAAACCAGTAGCAGTTCTCAAGAGACCT
AGCCAGCTAAGCAGAAAAAATAACATTCCAGCTAATTTTACCAGGAGTGGAAATAAATTAAATCATCAGAAAGATACTCG
TCAGGCAACTTTTCTTTTCAGAAGAGGCCTGAAGGTGCAGGCCCAGTTGAATACAGAACAACTGCTAGACGATGTAGTAG
CAAAGAGAACTCGTCAATGGCGGACTTCCACCACAAATGGAGGGATTTTGACTGTATCTATTGACAATCCTGGAGCAGTG
CAATGCCCAGTAACTCAGAAACCACGATTAACTCGTACTGCTGTACCTTCATTTTTAACAAAGCGGGAGCAAAGTGACGT
CAAGAAAGTTCCTAAAGGTGTTCCCCTGCAGTTTGACATAAACAGTGTCGGAAAACAGACAGGGATGACGTTGAATGAGC
GGTTTGGGATCCTGAAGGAACAAAGAGCCACTCTCACATACAACAAAGGGGGAAGCCGCTTTGTCACCGTGGGATAG

Library Parental gene expression (RPM)
bodymap2_adipose 118 .87 RPM
bodymap2_adrenal 100 .08 RPM
bodymap2_brain 81 .83 RPM
bodymap2_breast 124 .59 RPM
bodymap2_colon 156 .04 RPM
bodymap2_heart 110 .53 RPM
bodymap2_kidney 96 .95 RPM
bodymap2_liver 43 .58 RPM
bodymap2_lung 146 .08 RPM
bodymap2_lymph_node 112 .60 RPM
bodymap2_ovary 151 .23 RPM
bodymap2_prostate 128 .84 RPM
bodymap2_skeletal_muscle 199 .61 RPM
bodymap2_testis 200 .11 RPM
bodymap2_thyroid 187 .09 RPM
bodymap2_white_blood_cells 119 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000014874 ortholog_one2one 1 retrogene
retro_btau_1572,
Canis familiaris ENSCAFG00000029695 ortholog_one2many 1 retrogene
retro_cfam_70,
Choloepus hoffmanni ENSCHOG00000002881 ortholog_one2one 2 retrogenes
retro_chof_1068, retro_chof_114,
Callithrix jacchus ENSCJAG00000016488 ortholog_one2one 2 retrogenes
retro_cjac_1639, retro_cjac_623,
Cavia porcellus ENSCPOG00000011463 ortholog_one2one 2 retrogenes
retro_cpor_1039, retro_cpor_586,
Dasypus novemcinctus ENSDNOG00000007807 ortholog_one2one 6 retrogenes
retro_dnov_1010, retro_dnov_1224, retro_dnov_1311, retro_dnov_2013, retro_dnov_442, retro_dnov_570,
Erinaceus europaeus ENSEEUG00000001433 ortholog_one2many 1 retrogene
retro_eeur_13,
Echinops telfairi ENSETEG00000000700 ortholog_one2one 1 retrogene
retro_etel_765,
Gorilla gorilla ENSGGOG00000011665 ortholog_one2one 1 retrogene
retro_ggor_450,
Macaca mulatta ENSMMUG00000006626 ortholog_one2one 1 retrogene
retro_mmul_577,
Nomascus leucogenys ENSNLEG00000015547 ortholog_one2one 2 retrogenes
retro_nleu_1047, retro_nleu_889,
Pongo abelii ENSPPYG00000014456 ortholog_one2one 2 retrogenes
retro_pabe_258, retro_pabe_3497,
Pan troglodytes ENSPTRG00000015796 ortholog_one2one 1 retrogene
retro_ptro_357,
Sorex araneus ENSSARG00000009996 ortholog_one2one 1 retrogene
retro_sara_148,
Sarcophilus harrisii ENSSHAG00000005704 ortholog_one2one 1 retrogene
retro_shar_242,
Tupaia belangeri ENSTBEG00000005595 ortholog_one2one 4 retrogenes
retro_tbel_2469, retro_tbel_2943, retro_tbel_4257, retro_tbel_791,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_476 76.65 85.90
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2. retro_hsap_4291 68.07 55.14
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Download FASTA sequences of all ENSG00000122068 retrocopies