Parental gene:

ENSCAFG00000029695

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:33:28920449..28942838(-)


>ENSCAFG00000029695
GATGATATCATCAAATTGAATAGAAAGGAAGGAAAGAAGCAGAATTTTCCGAGACTAAATAGAAAACTCCAGCAAAGCAG
TGCCCGGCAATTCAGGATGAGAGTGCGATGGGGAATCCAACAGAATTCTGGTTTTGGCAAGAATAGTCTGAGCCGTAGAG
GAAGGGTAATGCCTGGAAAGAGACGTCCTTATGGAGTTATCACTGGCCTTGCAGCTAGGAAAGCAACTGGAATTCGAAAA
GGAATTAGTCCTATGAATCGACCACCTCTTAGTGATAAGAATATAGAACGATATTTTCCAGCATTAAAAAGGAAGGCCAA
CCTTCTGAGACAAAACGAAGTACAGAGAAAAGCAGTCGCAGTTCTCAAGAGACCTAACCAGTTAAATAGAAAAAATAACA
TTCCAGCCAATTTTACCAGGAGTGGAAATAAATTAAGTCATCAGAAAGATACTCGTCAGGCAACTTTTCTTTTCAGAAGA
GGCCTAAAGGTTCAGGCCCAGTTGAACACAGAACAACTGCTAGATGATGTAGTAGCAAAGAGAACTCGTCAATGGCGAAC
TTCCACCACAAATGGAGGAATTTTGACTGTCTCTATTGACAATCCTGGAGCAGTGCAGTGCCCAGTAACTCAGAAACCAC
GGTTAACTCGTACTGCTGTACCCTCATTCTTGACAAAACGGGAGCAATCTGATGTAAAGAAAGTTCCTAAAGGTGTCCCC
CTACAATTTGACATAAATAGTGTTGGAAAACAGACAGGGATGACTTTGAATGAGCGATTTGGGATCCTGAAGGAACAAAG
AGCCACTCTCACGTTCAACAAAGGAGGAAGCCGTTTTGTAACCGTGGGATAG

Library Parental gene expression (RPM)
SRP012049_cerebellum 5 .54 RPM
SRP017611_brain 4 .37 RPM
SRP017611_kidney 7 .26 RPM
SRP017611_liver 2 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000014874 ortholog_one2many 1 retrogene
retro_btau_1572,
Choloepus hoffmanni ENSCHOG00000002881 ortholog_one2many 2 retrogenes
retro_chof_1068, retro_chof_114,
Callithrix jacchus ENSCJAG00000016488 ortholog_one2many 2 retrogenes
retro_cjac_1639, retro_cjac_623,
Cavia porcellus ENSCPOG00000011463 ortholog_one2many 2 retrogenes
retro_cpor_1039, retro_cpor_586,
Dasypus novemcinctus ENSDNOG00000007807 ortholog_one2many 6 retrogenes
retro_dnov_1010, retro_dnov_1224, retro_dnov_1311, retro_dnov_2013, retro_dnov_442, retro_dnov_570,
Erinaceus europaeus ENSEEUG00000001433 ortholog_many2many 1 retrogene
retro_eeur_13,
Echinops telfairi ENSETEG00000000700 ortholog_one2many 1 retrogene
retro_etel_765,
Homo sapiens ENSG00000122068 ortholog_one2many 2 retrogenes
retro_hsap_4291, retro_hsap_476,
Gorilla gorilla ENSGGOG00000011665 ortholog_one2many 1 retrogene
retro_ggor_450,
Macaca mulatta ENSMMUG00000006626 ortholog_one2many 1 retrogene
retro_mmul_577,
Nomascus leucogenys ENSNLEG00000015547 ortholog_one2many 2 retrogenes
retro_nleu_1047, retro_nleu_889,
Pongo abelii ENSPPYG00000014456 ortholog_one2many 2 retrogenes
retro_pabe_258, retro_pabe_3497,
Pan troglodytes ENSPTRG00000015796 ortholog_one2many 1 retrogene
retro_ptro_357,
Sorex araneus ENSSARG00000009996 ortholog_one2many 1 retrogene
retro_sara_148,
Sarcophilus harrisii ENSSHAG00000005704 ortholog_one2many 1 retrogene
retro_shar_242,
Tupaia belangeri ENSTBEG00000005595 ortholog_one2many 4 retrogenes
retro_tbel_2469, retro_tbel_2943, retro_tbel_4257, retro_tbel_791,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_70 100.00 100.00
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Download FASTA sequences of all ENSCAFG00000029695 retrocopies