Parental gene:

ENSFCAG00000031337

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:B2:43748564..43751140(-)


>ENSFCAG00000031337
CCCGCCCTCCCTGTTCTTGCAGCCCCTGCCCGGATGGCAGCAGTAGTTCTAGGGAGAGACACCATGGGCCCCGAGCGTAT
CTTCCCCAATCAGACTGAGGAATTAGGGCCGCACCAGGGCCCTACGGAAGGCACTGGGGATTGGAGCAGCGAGGAGCCTG
AGGAAGAGCAGGAGGAAACGGGGGCAGGCCCAGCTGGCTACTCCTACCAACCCCTGAACCAAGATCCTGAACCAGAGGAG
GTGGAGCTGGCACCGGTGGGGGATGGAGAAGATGTAGTTGCTGATATTCAGGATCGGATCCAGGCCCTGGGGCTTCATTT
GCCAGACCCGCCATTAGAGAGCGAGGATGAAGAGGAGGAAGGAGCCACAGGATTGAGCAACCACAGCTCTATTCCCATGG
ACCCGGAACATGTGGAGTTGGTGAAAAGGACAATGGCTGGAGTAAGCCTGCCTGCGCCAGGGGTTCCTGCCTGGGCTCGG
GAGATATCAGATGCCCAGTGGGAAGATGTGGTACAGAAGGCCCTCCAAGCCCGGCAGGGGACGACCCCAGCCTGGAAGTG
A

Library Parental gene expression (RPM)
SRP017611_brain 47 .97 RPM
SRP017611_kidney 39 .57 RPM
SRP017611_liver 16 .78 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012655 ortholog_one2many 1 retrogene
retro_amel_1620,
Bos taurus ENSBTAG00000005536 ortholog_many2many 1 retrogene
retro_btau_240,
Canis familiaris ENSCAFG00000001756 ortholog_one2many 1 retrogene
retro_cfam_1643,
Callithrix jacchus ENSCJAG00000004894 ortholog_one2many 2 retrogenes
retro_cjac_2054, retro_cjac_824,
Cavia porcellus ENSCPOG00000022111 ortholog_one2many 1 retrogene
retro_cpor_1530,
Echinops telfairi ENSETEG00000002439 ortholog_many2many 1 retrogene
retro_etel_236,
Loxodonta africana ENSLAFG00000013881 ortholog_many2many 1 retrogene
retro_lafr_60,
Myotis lucifugus ENSMLUG00000012138 ortholog_one2many 2 retrogenes
retro_mluc_1819, retro_mluc_851,
Monodelphis domestica ENSMODG00000019002 ortholog_one2many 1 retrogene
retro_mdom_878,
Oryctolagus cuniculus ENSOCUG00000001565 ortholog_one2many 2 retrogenes
retro_ocun_1312, retro_ocun_1446,
Pelodiscus sinensis ENSPSIG00000002330 ortholog_one2many 1 retrogene
retro_psin_56,
Pteropus vampyrus ENSPVAG00000008711 ortholog_one2many 1 retrogene
retro_pvam_266,
Rattus norvegicus ENSRNOG00000017144 ortholog_one2many 2 retrogenes
retro_rnor_716, retro_rnor_961,
Tupaia belangeri ENSTBEG00000012294 ortholog_one2many 2 retrogenes
retro_tbel_1462, retro_tbel_3528,
Tursiops truncatus ENSTTRG00000006996 ortholog_one2many 1 retrogene
retro_ttru_357,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1772 56.74 74.19
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Download FASTA sequences of all ENSFCAG00000031337 retrocopies