Parental gene:

ENSFCAG00000023254

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:A2:100132447..100157303(-)


>ENSFCAG00000023254
ATGTCAGAGAAAAAGCAGCCAGTAGATTTGGGTCTCTTGGAGGAGGACGACGAGTTCGAGGAGTTCCCTGCGGAAGACTG
GGCTGGTTTGGATGAGGATGAAGATGCACATGTCTGGGAGGATAATTGGGATGATGACAATGTAGAGGATGACTTCTCCA
ATCAGTTACGAGCTGAACTAGAGAAACATGGTTATAAGATGGAGACTTCATAG

Library Parental gene expression (RPM)
SRP017611_brain 16 .99 RPM
SRP017611_kidney 37 .20 RPM
SRP017611_liver 16 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010434 ortholog_one2one 1 retrogene
retro_amel_1234,
Canis familiaris ENSCAFG00000002179 possible_ortholog 1 retrogene
retro_cfam_1174,
Cavia porcellus ENSCPOG00000010402 possible_ortholog 1 retrogene
retro_cpor_446,
Equus caballus ENSECAG00000018179 ortholog_one2one 1 retrogene
retro_ecab_360,
Erinaceus europaeus ENSEEUG00000002237 ortholog_one2one 2 retrogenes
retro_eeur_290, retro_eeur_586,
Echinops telfairi ENSETEG00000019778 possible_ortholog 1 retrogene
retro_etel_961,
Myotis lucifugus ENSMLUG00000014208 ortholog_one2many 1 retrogene
retro_mluc_948,
Oryctolagus cuniculus ENSOCUG00000026246 possible_ortholog 3 retrogenes
retro_ocun_1324, retro_ocun_452, retro_ocun_77,
Sus scrofa ENSSSCG00000015337 possible_ortholog 1 retrogene
retro_sscr_67,
Ictidomys tridecemlineatus ENSSTOG00000011501 ortholog_one2one 1 retrogene
retro_itri_253,
Tupaia belangeri ENSTBEG00000016474 ortholog_one2one 3 retrogenes
retro_tbel_2837, retro_tbel_2998, retro_tbel_3844,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_121 78.87 98.57
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2. retro_fcat_1138 71.43 100.00
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Download FASTA sequences of all ENSFCAG00000023254 retrocopies