Parental gene:

MRPL15, ENSEEUG00000001454

Aliases:None
Description:mitochondrial ribosomal protein L15 [Source:HGNC Symbol;Acc:14054]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_4133:645..9624(+)


>ENSEEUG00000001454
ATGGCGGCTCCCGTGCGGGGCGGCGGGTCTCGGGCCCTGGACCTGCTCCGGGGTCTGCCTCGTGTGAGCCTGGCCAACTT
AAAGCCGAATCCAGGGTCCAGGAAACAGGAAAGACGTCCAAGAGGTAAAAGGAGAGGTAGGAAATGTGGCAGAGGCCATA
AAGGAAACCGACAGAAAGGAACCCGTCCCCGACTGGGCTTTGAGGGAAGCCAAACTCCGTACCTCCTATTCCCAAAATAT
GGTTTTAATGAAGGACATAGCTTCCGACGCCAGTATCACCCTTTGAGTCTCCATAGACTGCAGTATCTTATTGATTTGGG
TCGAGTTGATCCTACTCAGCCTATTGACTTAACCCAGCTTGTCAATGGGCGAGGTGTGACCATCCAGCCTCTTAAAAGGG
ACTATGGTGTCCATCTAGTAGAGGAGGGTGCTGATACGTTTAAGGCGAAAGTTAATATCGAAGTACAGTTGGCTTCAGAG
GTAGCCATTGCTGCAATTGAGAAAAACGGTGGTGTTGTCACTACAGCCTTCTATGATCCGAGAAGTCTGGACATTTTATG
CAAACCTATTCCATTCTTTCTGCGTGGACAACCCATTCCCAAACGAATGCTTCCTCCAGAAGAACTGGTCCCGTATTACA
CTGATGCAAAGAATCGTGGCTACCTGGCTGATCCTGGCAAATATCCTGAAGCAAGACTTGAACTTGCCAAGAAATATGGT
TATATTTTACCTGATATCACAAAAGATGAACTCTTCAAAATGCTTAGTACTCGGAAGGACCCAAGACAGATTTTCTTTGG
TCTCGCTCCTGGATGGGTGGTGAACATGGCAGATAGGAAAATCCTAAAACCTACAGATGAGAATCTCCTCAAGTATTATA
GCTCATGA

Library Parental gene expression (RPM)
SRP017611_brain 26 .43 RPM
SRP017611_kidney 54 .20 RPM
SRP017611_liver 36 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000001174 ortholog_one2one 1 retrogene
retro_btau_324,
Canis familiaris ENSCAFG00000006988 ortholog_one2one 2 retrogenes
retro_cfam_1573, retro_cfam_511,
Choloepus hoffmanni ENSCHOG00000005299 ortholog_one2one 3 retrogenes
retro_chof_1379, retro_chof_1719, retro_chof_746,
Callithrix jacchus ENSCJAG00000016719 ortholog_one2one 1 retrogene
retro_cjac_2230,
Dasypus novemcinctus ENSDNOG00000017664 ortholog_one2one 1 retrogene
retro_dnov_364,
Echinops telfairi ENSETEG00000001724 ortholog_one2one 1 retrogene
retro_etel_1304,
Mustela putorius furo ENSMPUG00000010533 ortholog_one2many 1 retrogene
retro_mputfur_149,
Mus musculus ENSMUSG00000033845 ortholog_one2one 2 retrogenes
retro_mmus_1709, retro_mmus_3534,
Ornithorhynchus anatinus ENSOANG00000007286 ortholog_one2one 1 retrogene
retro_oana_114,
Otolemur garnettii ENSOGAG00000003768 ortholog_one2one 1 retrogene
retro_ogar_534,
Ochotona princeps ENSOPRG00000000921 ortholog_one2one 2 retrogenes
retro_opri_241, retro_opri_364,
Rattus norvegicus ENSRNOG00000008566 ortholog_one2one 2 retrogenes
retro_rnor_1344, retro_rnor_2785,
Sus scrofa ENSSSCG00000030578 ortholog_one2one 1 retrogene
retro_sscr_617,
Tarsius syrichta ENSTSYG00000014106 ortholog_one2many 1 retrogene
retro_tsyr_37,
Tursiops truncatus ENSTTRG00000011844 ortholog_one2one 2 retrogenes
retro_ttru_1139, retro_ttru_733,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_128 87.54 94.92
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2. retro_eeur_707 75.00 59.32
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Download FASTA sequences of all ENSEEUG00000001454 retrocopies