Parental gene:

ENSECAG00000011843

Aliases:None
Description:None
Organism:Horse (Equus caballus)
Coordinates:14:36525237..36583981(+)


>ENSECAG00000011843
ATGGCGGCGCCCGTGGATCTGGAGTTGAAGAAGGCTTTTACAGAGCTTCAAGCCAAAGTTATTGACACTCAGCAGAAGGT
GAAGCTTGCAGACATACAGATTGAACAGCTAAACAGAACGAAAAAGCATGCACATCTTACAGATACAGAGATTATGACTT
TGGTAGATGAGACTAACATGTATGAAGGTGTAGGAAGAATGTTTATTCTTCAATCCAAGGAGGTAATTCACAATCAGCTA
TTAGAGAAACAGAAAATAGCAGAAGAAAAAATTAAAGAATTGGAACAGAAAAAATCCTACCTGGAGCGGAGCGTGAAGGA
AGCTGAGGACAACATCCGGGAGATGCTGATGGCACGAAGGGCCCAGTAG

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 4 .43 RPM
SRP021940_cerebellum 5 .66 RPM
SRP021940_embryo 12 .25 RPM
SRP021940_placental_villous 7 .65 RPM
SRP021940_synovial_membrane 4 .91 RPM
SRP021940_testis 31 .84 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005742 possible_ortholog 8 retrogenes
retro_cfam_1742, retro_cfam_1893, retro_cfam_1943, retro_cfam_251, retro_cfam_276, retro_cfam_417, retro_cfam_788, retro_cfam_997,
Erinaceus europaeus ENSEEUG00000005357 possible_ortholog 1 retrogene
retro_eeur_537,
Echinops telfairi ENSETEG00000019281 ortholog_one2many 1 retrogene
retro_etel_1629,
Felis catus ENSFCAG00000001272 ortholog_one2one 1 retrogene
retro_fcat_1323,
Homo sapiens ENSG00000113068 possible_ortholog 1 retrogene
retro_hsap_2606,
Macropus eugenii ENSMEUG00000002726 ortholog_one2many 3 retrogenes
retro_meug_380, retro_meug_686, retro_meug_801,
Microcebus murinus ENSMICG00000000349 ortholog_one2one 1 retrogene
retro_mmur_1121,
Oryctolagus cuniculus ENSOCUG00000009432 ortholog_one2one 4 retrogenes
retro_ocun_1049, retro_ocun_1885, retro_ocun_804, retro_ocun_999,
Otolemur garnettii ENSOGAG00000003376 ortholog_one2one 6 retrogenes
retro_ogar_1025, retro_ogar_1216, retro_ogar_1412, retro_ogar_2217, retro_ogar_3129, retro_ogar_89,
Pan troglodytes ENSPTRG00000017310 possible_ortholog 1 retrogene
retro_ptro_1757,
Rattus norvegicus ENSRNOG00000018653 ortholog_one2one 1 retrogene
retro_rnor_985,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_53 88.33 98.36
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Download FASTA sequences of all ENSECAG00000011843 retrocopies