Parental gene:

PFDN1, ENSG00000113068

Aliases:PFDN1, PDF, PFD1
Description:prefoldin subunit 1 [Source:HGNC Symbol;Acc:8866]
Organism:Human (Homo sapiens)
Coordinates:5:139624623..139682706(-)


>ENSG00000113068
ATGGCCGCCCCCGTGGATCTAGAGCTGAAGAAGGCCTTCACAGAGCTTCAAGCCAAAGTTATTGACACTCAACAGAAGGT
GAAGCTCGCAGACATACAGATTGAACAGCTAAACAGAACGAAAAAGCATGCACATCTTACAGATACAGAGATCATGACTT
TGGTAGATGAGACTAACATGTATGAAGGTGTAGGAAGAATGTTTATTCTTCAGTCCAAGGAAGCAATTCACAGTCAGCTG
TTAGAGAAGCAGAAAATAGCAGAAGAAAAAATTAAAGAACTAGAACAGAAAAAGTCCTACCTGGAGCGAAGCGTTAAGGA
AGCTGAGGACAACATCCGGGAGATGCTGATGGCACGAAGGGCCCAGTAG

Library Parental gene expression (RPM)
bodymap2_adipose 30 .47 RPM
bodymap2_adrenal 40 .73 RPM
bodymap2_brain 46 .27 RPM
bodymap2_breast 32 .76 RPM
bodymap2_colon 40 .01 RPM
bodymap2_heart 35 .91 RPM
bodymap2_kidney 32 .74 RPM
bodymap2_liver 11 .96 RPM
bodymap2_lung 34 .27 RPM
bodymap2_lymph_node 29 .95 RPM
bodymap2_ovary 30 .57 RPM
bodymap2_prostate 48 .29 RPM
bodymap2_skeletal_muscle 29 .88 RPM
bodymap2_testis 41 .36 RPM
bodymap2_thyroid 33 .39 RPM
bodymap2_white_blood_cells 41 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005742 possible_ortholog 8 retrogenes
retro_cfam_1742, retro_cfam_1893, retro_cfam_1943, retro_cfam_251, retro_cfam_276, retro_cfam_417, retro_cfam_788, retro_cfam_997,
Equus caballus ENSECAG00000011843 possible_ortholog 1 retrogene
retro_ecab_53,
Echinops telfairi ENSETEG00000019281 ortholog_one2one 1 retrogene
retro_etel_1629,
Macropus eugenii ENSMEUG00000002726 ortholog_one2one 3 retrogenes
retro_meug_380, retro_meug_686, retro_meug_801,
Otolemur garnettii ENSOGAG00000003376 possible_ortholog 6 retrogenes
retro_ogar_1025, retro_ogar_1216, retro_ogar_1412, retro_ogar_2217, retro_ogar_3129, retro_ogar_89,
Pan troglodytes ENSPTRG00000017310 ortholog_one2one 1 retrogene
retro_ptro_1757,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2606 93.48 74.59
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Download FASTA sequences of all ENSG00000113068 retrocopies