Parental gene:

Pfdn1, ENSRNOG00000018653

Aliases:None
Description:prefoldin subunit 1 [Source:RefSeq peptide;Acc:NP_001101897]
Organism:Rat (Rattus norvegicus)
Coordinates:18:28940033..28997301(-)


>ENSRNOG00000018653
ATGGCCGCCTCCGTGGATCTGGAGTTGAAGAAGGCCTTCACAGAGCTTCAAGCCAAAGTTATTGATACTCAACAGAAGGT
GAAGCTTGCAGACATACAGATTGAACAGCTAAACAGGACAAAAAAGCACGCACACCTTACGGACACGGAGATCATGACAC
TGGTGGATGAGACTAACATGTATGAAGGTGTAGGAAGAATGTTTATTCTACAGTCCAAGGAAGTAATTCACAACCAGCTG
TTAGAAAAACAGAAAATAGCAGAAGAAAAAATTAAAGAGCTGGAGCAGAAAAAGTCCTACCTGGAACGGAGTGTTAAGGA
AGCTGAAGACAACATCCGAGAAATGCTGATGGCTCGAAGGGCACAGTAG

Library Parental gene expression (RPM)
SRP017611_brain 37 .17 RPM
SRP017611_kidney 35 .59 RPM
SRP017611_liver 18 .36 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005742 possible_ortholog 8 retrogenes
retro_cfam_1742, retro_cfam_1893, retro_cfam_1943, retro_cfam_251, retro_cfam_276, retro_cfam_417, retro_cfam_788, retro_cfam_997,
Equus caballus ENSECAG00000011843 ortholog_one2one 1 retrogene
retro_ecab_53,
Echinops telfairi ENSETEG00000019281 ortholog_one2one 1 retrogene
retro_etel_1629,
Felis catus ENSFCAG00000001272 ortholog_one2one 1 retrogene
retro_fcat_1323,
Macropus eugenii ENSMEUG00000002726 ortholog_one2one 3 retrogenes
retro_meug_380, retro_meug_686, retro_meug_801,
Microcebus murinus ENSMICG00000000349 ortholog_one2one 1 retrogene
retro_mmur_1121,
Oryctolagus cuniculus ENSOCUG00000009432 ortholog_one2one 4 retrogenes
retro_ocun_1049, retro_ocun_1885, retro_ocun_804, retro_ocun_999,
Otolemur garnettii ENSOGAG00000003376 ortholog_one2one 6 retrogenes
retro_ogar_1025, retro_ogar_1216, retro_ogar_1412, retro_ogar_2217, retro_ogar_3129, retro_ogar_89,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_985 75.96 81.97
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Download FASTA sequences of all ENSRNOG00000018653 retrocopies