Parental gene:

Rps4x, ENSDORG00000008571

Aliases:None
Description:ribosomal protein S4, X-linked [Source:MGI Symbol;Acc:MGI:98158]
Organism:Kangaroo rat (Dipodomys ordii)
Coordinates:GeneScaffold_6456:877..14156(-)


>ENSDORG00000008571
ATGGCTCGTGGTCCCAAGAAGCATCTGAAGCGGGTAGCCGCTCCTAAGCATTGGATGTTGGATAAACTGACTGGTGTATT
TGCTCCTCGTCCATCCACCGGTCCCCACAAGCTGAGAGAATGTCTGCCTCTCATCATTTTCCTAAGGAACAGGCTTAAGT
ATGCCTTAACAGGAGATGAAGTGAAGAAAATCTGCATGCAGCGTTTCATTAAGATTGATGGCAAAGTCAGAACTGATATC
ACCTACCCTGCTGGTTTTATGGATGTCATCAGCATCGATAAGACTGGGGAGAATTTCCGTCTGATCTATGACACCAAGGG
TCGCTTTGCTGTTCACCGCATAACACCAGAGGAGGCCAAGTACAAGTTGTGCAAAGTGAGAAAGATCTTTGTTGGCACAA
AAGGAATCCCTCATCTGGTGACTCATGATGCTCGAACCATTCGCTACCCAGATCCCCTCATCAAAGTCAATGACACCATT
CAAATTGATTTGGAGACCGGCAAGATAACAGATTTCATCAAGTTTGACACTGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCAATAAACCTTGGATTTCTCTTCCCCGA
GGAAAGGGGATCCGCCTCACCATCGCTGAAGAAAGAGACAAGAGGCTGGCAGCCAAACAGAGCAGTGGGTGA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000014601 ortholog_one2one 1 retrogene
retro_acar_82,
Bos taurus ENSBTAG00000018800 possible_ortholog 5 retrogenes
retro_btau_119, retro_btau_125, retro_btau_146, retro_btau_33, retro_btau_76,
Canis familiaris ENSCAFG00000017151 possible_ortholog 2 retrogenes
retro_cfam_165, retro_cfam_194,
Cavia porcellus ENSCPOG00000006337 possible_ortholog 3 retrogenes
retro_cpor_1023, retro_cpor_1075, retro_cpor_31,
Equus caballus ENSECAG00000010852 possible_ortholog 6 retrogenes
retro_ecab_34, retro_ecab_435, retro_ecab_443, retro_ecab_614, retro_ecab_757, retro_ecab_850,
Homo sapiens ENSG00000129824 possible_ortholog 1 retrogene
retro_hsap_1704,
Meleagris gallopavo ENSMGAG00000009671 ortholog_one2many 1 retrogene
retro_mgal_3,
Myotis lucifugus ENSMLUG00000011685 ortholog_one2one 5 retrogenes
retro_mluc_1638, retro_mluc_2253, retro_mluc_301, retro_mluc_536, retro_mluc_736,
Monodelphis domestica ENSMODG00000011070 possible_ortholog 1 retrogene
retro_mdom_238,
Mustela putorius furo ENSMPUG00000005294 possible_ortholog 11 retrogenes
retro_mputfur_1044, retro_mputfur_1176, retro_mputfur_1325, retro_mputfur_1326, retro_mputfur_1393, retro_mputfur_160, retro_mputfur_205, retro_mputfur_48, retro_mputfur_725, retro_mputfur_876, retro_mputfur_988,
Otolemur garnettii ENSOGAG00000011808 possible_ortholog 2 retrogenes
retro_ogar_121, retro_ogar_229,
Pan troglodytes ENSPTRG00000022470 possible_ortholog 1 retrogene
retro_ptro_1153,
Rattus norvegicus ENSRNOG00000003201 possible_ortholog 1 retrogene
retro_rnor_135,
Tarsius syrichta ENSTSYG00000003137 ortholog_one2one 16 retrogenes
retro_tsyr_1159, retro_tsyr_1167, retro_tsyr_118, retro_tsyr_1302, retro_tsyr_1333, retro_tsyr_1774, retro_tsyr_1792, retro_tsyr_1931, retro_tsyr_1936, retro_tsyr_2116, retro_tsyr_409, retro_tsyr_440, retro_tsyr_522, retro_tsyr_529, retro_tsyr_750, retro_tsyr_917,
Vicugna pacos ENSVPAG00000010952 ortholog_one2one 4 retrogenes
retro_vpac_244, retro_vpac_460, retro_vpac_604, retro_vpac_653,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dord_68 97.18 67.30
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2. retro_dord_289 75.91 51.71
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3. retro_dord_650 85.11 53.23
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4. retro_dord_745 82.12 67.30
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Download FASTA sequences of all ENSDORG00000008571 retrocopies