Parental gene: | RBM3, ENSDNOG00000010420 |
| Aliases: | None |
| Description: | RNA binding motif (RNP1, RRM) protein 3 [Source:HGNC Symbol;Acc:9900] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_45440:4607..6115(+) |
>ENSDNOG00000010420
GTCGTCGTCAAAGACCGGGAGACTCAGCGGTCTAGGGGTGGCTTCATCACCTTCACCAACCCAGAGCATGCCTCAGATGC
CATGCAGGCCATGGGAGAGTCCCTGGATGGCCGCCAGATCCGTGTGGACCATGCGGGCAAGTCAGCCAGGGGAACCAGAG
GGGGTGCCTTTGGGGGTCATGGGCGTGGTCGCAGCTACTCTCGAGGTGGTGGGGACCAAGGATATGGGAGCAGCCGGTAT
GACAGTCGGCCTGGAGGATATGGATATGGATATGGCAGGTCCAGAGACTATGGTGGCAGAAACCAGGGTGGTTATGACCG
CTACTCTGGAGGAAATTACAGAGACAATTATGACAACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 56 .40 RPM |
| SRP012922_cerebellum | 29 .42 RPM |
| SRP012922_heart | 22 .28 RPM |
| SRP012922_kidney | 38 .06 RPM |
| SRP012922_liver | 23 .53 RPM |
| SRP012922_lung | 50 .86 RPM |
| SRP012922_quadricep_muscle | 14 .02 RPM |
| SRP012922_spleen | 71 .19 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000013718 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000025848 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000015485 | possible_ortholog | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000003553 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000017199 | within_species_paralog | 3 retrogenes | |
| Gadus morhua | ENSGMOG00000012137 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000007003 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000020314 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000021591 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000027493 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_151 | 73.28 | 92.44 | Please wait, loading  |
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| 2. | retro_dnov_180 | 85.95 | 100.00 | Please wait, loading |
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| 3. | retro_dnov_212 | 64.91 | 91.60 | Please wait, loading |
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| 4. | retro_dnov_213 | 68.33 | 98.32 | Please wait, loading |
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| 5. | retro_dnov_733 | 63.01 | 57.98 | Please wait, loading |
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| 6. | retro_dnov_778 | 66.95 | 97.48 | Please wait, loading |
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| 7. | retro_dnov_974 | 58.33 | 58.82 | Please wait, loading |
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| 8. | retro_dnov_1343 | 94.02 | 94.96 | Please wait, loading |
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| 9. | retro_dnov_1380 | 95.38 | 53.78 | Please wait, loading |
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| 10. | retro_dnov_1463 | 88.43 | 100.00 | Please wait, loading |
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| 11. | retro_dnov_1718 | 86.89 | 100.00 | Please wait, loading |
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| 12. | retro_dnov_2034 | 89.26 | 100.00 | Please wait, loading |
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| 13. | retro_dnov_2076 | 59.55 | 73.95 | Please wait, loading |
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| 14. | retro_dnov_2217 | 73.91 | 55.46 | Please wait, loading |
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| 15. | retro_dnov_2367 | 73.39 | 100.00 | Please wait, loading |
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| 16. | retro_dnov_2581 | 92.05 | 72.27 | Please wait, loading |
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Download FASTA sequences of all ENSDNOG00000010420 retrocopies