Parental gene:

TCEB2, ENSCPOG00000021024

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_4:22862085..22864863(+)


>ENSCPOG00000021024
CAGGACGTGTTCCTCATGATCCGGCGCCACAAGACCACCATCTTCACGGACGCCAAGGAGTCGAGCACCGTGTTCGAGCT
GAAGCGCATCGTCGAGGGCATTCTCAAGCGGCCGCCCGACGAGCAGAGACTTTACAAGGATGACCAGCTACTAGATGATG
GCAAAACGCTGGGCGAGTGTGGTTTTACCAGCCAGACAGCAAGGCCACAAGCCCCAGCCACAGTGGGCCTGGCCTTCCGG
GCAGATGACACCTTTGAGGCCCTACGCATTGAGCCCTTCTCTAGCCCACCGGAGCTTCCAGATGTCATGAAGCCTCAGGA
CTCTGGAGGTAGCGCCAATGAACAAGCTGTGCAGTGA

Library Parental gene expression (RPM)
SRP017611_brain 24 .16 RPM
SRP017611_kidney 66 .58 RPM
SRP017611_liver 48 .58 RPM
SRP040447_lung 52 .36 RPM
SRP040447_skeletal_muscle 74 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019543 ortholog_one2many 3 retrogenes
retro_btau_142, retro_btau_17, retro_btau_29,
Callithrix jacchus ENSCJAG00000015347 ortholog_one2one 10 retrogenes
retro_cjac_1593, retro_cjac_1606, retro_cjac_2051, retro_cjac_2613, retro_cjac_2987, retro_cjac_3030, retro_cjac_342, retro_cjac_3819, retro_cjac_639, retro_cjac_959,
Felis catus ENSFCAG00000004711 ortholog_one2many 2 retrogenes
retro_fcat_112, retro_fcat_40,
Homo sapiens ENSG00000103363 ortholog_one2one 2 retrogenes
retro_hsap_1246, retro_hsap_940,
Gorilla gorilla ENSGGOG00000015306 ortholog_one2many 1 retrogene
retro_ggor_976,
Monodelphis domestica ENSMODG00000016536 ortholog_one2many 4 retrogenes
retro_mdom_1149, retro_mdom_1617, retro_mdom_1964, retro_mdom_23,
Mustela putorius furo ENSMPUG00000015265 ortholog_one2one 1 retrogene
retro_mputfur_469,
Mus musculus ENSMUSG00000055839 ortholog_one2one 7 retrogenes
retro_mmus_1212, retro_mmus_1489, retro_mmus_1664, retro_mmus_2930, retro_mmus_511, retro_mmus_747, retro_mmus_99,
Nomascus leucogenys ENSNLEG00000009471 ortholog_one2many 2 retrogenes
retro_nleu_295, retro_nleu_89,
Oryctolagus cuniculus ENSOCUG00000010116 ortholog_one2one 2 retrogenes
retro_ocun_202, retro_ocun_930,
Pongo abelii ENSPPYG00000007013 ortholog_one2many 1 retrogene
retro_pabe_74,
Pan troglodytes ENSPTRG00000007663 ortholog_one2many 1 retrogene
retro_ptro_857,
Rattus norvegicus ENSRNOG00000004814 ortholog_one2many 6 retrogenes
retro_rnor_1226, retro_rnor_1275, retro_rnor_185, retro_rnor_1948, retro_rnor_35, retro_rnor_352,
Sus scrofa ENSSSCG00000008061 ortholog_one2one 1 retrogene
retro_sscr_858,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1416 83.19 100.00
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Download FASTA sequences of all ENSCPOG00000021024 retrocopies