Parental gene:

MAGOH, ENSCPOG00000011511

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_321:42274..51116(+)


>ENSCPOG00000011511
ATGGAAAGTGACTTTTATCTGCGTTATTACGTGGGTCACAAAGGCAAGTTCGGTCACGAATTCCTGGAGTTCGAGTTCCG
GCCCGATGGGAAATTGAGATACGCCAACAACAGCAATTACAAAAACGATGTTATGATCAGAAAAGAGGCCTATGTACATA
AAAGTGTGATGGAGGAACTGAAGAGAATAATTGATGACAGTGAAATTACCAAAGAGGATGATGCTCTGTGGCCTCCTCCT
GACAGAGTAGGCCGGCAGGAGCTTGAAATTGTCATTGGAGATGAACACATTTCTTTCACAACATCAAAAATTGGTTCTCT
TATTGATGTCAATCAGTCCAAGGACCCAGAAGGCTTAAGAGTATTTTATTATCTTGTCCAAGACTTGAAGTGCTTGGTCT
TCAGTCTTATTGGATTACACTTCAAGATCAAACCAATTTAG

Library Parental gene expression (RPM)
SRP017611_brain 5 .69 RPM
SRP017611_kidney 7 .54 RPM
SRP017611_liver 7 .57 RPM
SRP040447_lung 11 .12 RPM
SRP040447_skeletal_muscle 4 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000004538 ortholog_one2one 1 retrogene
retro_cjac_1902,
Homo sapiens ENSG00000162385 ortholog_one2one 2 retrogenes
retro_hsap_1803, retro_hsap_3318,
Gorilla gorilla ENSGGOG00000007594 ortholog_one2one 2 retrogenes
retro_ggor_1303, retro_ggor_1326,
Microcebus murinus ENSMICG00000006406 ortholog_one2one 2 retrogenes
retro_mmur_70, retro_mmur_781,
Myotis lucifugus ENSMLUG00000002444 ortholog_one2one 1 retrogene
retro_mluc_1844,
Nomascus leucogenys ENSNLEG00000017987 ortholog_one2one 2 retrogenes
retro_nleu_2515, retro_nleu_2682,
Oryctolagus cuniculus ENSOCUG00000001880 ortholog_one2one 5 retrogenes
retro_ocun_1295, retro_ocun_1720, retro_ocun_1872, retro_ocun_1915, retro_ocun_1923,
Otolemur garnettii ENSOGAG00000013328 ortholog_one2one 2 retrogenes
retro_ogar_1954, retro_ogar_24,
Ochotona princeps ENSOPRG00000009020 ortholog_one2one 1 retrogene
retro_opri_521,
Pongo abelii ENSPPYG00000001335 ortholog_one2one 2 retrogenes
retro_pabe_1479, retro_pabe_2733,
Pan troglodytes ENSPTRG00000000753 ortholog_one2one 1 retrogene
retro_ptro_2156,
Rattus norvegicus ENSRNOG00000012778 ortholog_one2one 1 retrogene
retro_rnor_1168,
Ictidomys tridecemlineatus ENSSTOG00000001253 ortholog_one2one 3 retrogenes
retro_itri_373, retro_itri_379, retro_itri_932,
Tupaia belangeri ENSTBEG00000011611 ortholog_one2one 17 retrogenes
retro_tbel_1016, retro_tbel_1120, retro_tbel_1213, retro_tbel_140, retro_tbel_1513, retro_tbel_185, retro_tbel_2030, retro_tbel_2031, retro_tbel_2349, retro_tbel_2355, retro_tbel_2525, retro_tbel_3186, retro_tbel_328, retro_tbel_4512, retro_tbel_4540, retro_tbel_735, retro_tbel_809,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_338 76.85 72.60
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Download FASTA sequences of all ENSCPOG00000011511 retrocopies