Parental gene:

FAM122B, ENSCPOG00000011218

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_128:3076618..3096413(-)


>ENSCPOG00000011218
ATGGCTCAGGAGAAAATGGAGCTGGACTTTGAGCCTGACATCTCTCTTGGGAGTACCCTGAGGAGGTCCAACAGCGCTCC
CCTGATCCATGGGCTCAGCGATTTTTCACAGGTTTTTCAACCTTACTCGTTTAAAACTCGGAGGAATAGTACAACAATTA
TGAACAGCCGCACTTTTTTGCTGCCATCTTCAACTAATCGTATTCCTAGTAGCAGACTGCATCAAATCAAAAGGGAAGAA
GGCCTGGATATAATGAATAGAGAAACTGCACATGAAAGGGAGGTGCAAACAGCTATGCAGATAAGCCAGTCGTGGGATGA
AAGCTTGAACCTGAGCGATAATGATTTTGACAAGCCGGAGAAACTGTATTCTCCTAAGAGAATTGACTTCACTCCAGTTT
CCCCAGCACCTTCACCCACCAGAGGATTTGGAAAGCAATGCTTTTCACCATCTTTACAAATGTTTGTGAGCAGCAGTGGA
TTGCCATCGAGTACTTTTGGAACTCCGAGACGATTTTCAACCCGGAGAAGTCAAAGCCCAGTGAAGTGCATTAGACCCAG
TGTTCTTGGTCCTATTAAGAGAAAAGGTGAGATGGAGACTGAAAGCCAGCCCAAGAGACTCTTTCAAGGCACCACCAACA
TGCTCTCTCCAGATGCGGCACAACTGTCTGATCTCAATTCATGCTTTGTCCTCAGTCCGGATGTTATGGATGGCAGTAGT
AGCAGCAGTGGCTTATCCTCAGACTCACTGGCTACAGGCAGCGCTCCCGCAGAATCTCCAGTAGCATGCTCCAATTCATG
CTCTCCGTTCATGTTCTCTGTGGATTACATACTTTCCAAT

Library Parental gene expression (RPM)
SRP017611_brain 22 .89 RPM
SRP017611_kidney 13 .92 RPM
SRP017611_liver 4 .88 RPM
SRP040447_lung 15 .18 RPM
SRP040447_skeletal_muscle 3 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001311 ortholog_one2one 1 retrogene
retro_amel_105,
Bos taurus ENSBTAG00000001886 ortholog_one2one 1 retrogene
retro_btau_103,
Canis familiaris ENSCAFG00000018882 ortholog_one2one 1 retrogene
retro_cfam_181,
Callithrix jacchus ENSCJAG00000004313 ortholog_one2one 1 retrogene
retro_cjac_594,
Equus caballus ENSECAG00000018643 ortholog_one2one 1 retrogene
retro_ecab_91,
Felis catus ENSFCAG00000024842 ortholog_one2one 1 retrogene
retro_fcat_1575,
Myotis lucifugus ENSMLUG00000007988 ortholog_one2one 1 retrogene
retro_mluc_382,
Macaca mulatta ENSMMUG00000016948 ortholog_one2one 1 retrogene
retro_mmul_185,
Mustela putorius furo ENSMPUG00000012690 ortholog_one2one 1 retrogene
retro_mputfur_64,
Mus musculus ENSMUSG00000036022 ortholog_one2one 1 retrogene
retro_mmus_22,
Rattus norvegicus ENSRNOG00000050146 ortholog_one2many 1 retrogene
retro_rnor_651,
Sus scrofa ENSSSCG00000012685 ortholog_one2one 1 retrogene
retro_sscr_60,
Ictidomys tridecemlineatus ENSSTOG00000006261 ortholog_one2one 1 retrogene
retro_itri_61,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_80 66.02 91.07
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Download FASTA sequences of all ENSCPOG00000011218 retrocopies