Parental gene:

ATP5G3, ENSCPOG00000006194

Aliases:None
Description:ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9) [Source:HGNC Symbol;Acc:843]
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_3:14999560..15002149(+)


>ENSCPOG00000006194
ATGTTCGCCTGCGCCAAGCTCGCCTGCACACCCGCTCTGATCCGCGCTGGATCCAGAGTAGCATACAGACCAATTTCTGC
ATCAGTGTTATCTCGGCCAGAGACTAGGACTGGAGAGGGCTCTTTGGTATTTAATGGAGCCCAGAATGGTGTGTGTCAGC
TAATCCGAAGGGAGTTTCAGACCAGTGCAATCAGCAGAGACATTGATACTGCTGCCAAATTTATTGGTGCAGGTGCTGCA
ACAGTAGGAGTGGCTGGTTCTGGTGCTGGTATTGGAACAGTCTTTGGCAGTCTTATCATTGGTTATGCCAGAAACCCTTC
GCTGAAGCAGCAGCTGTTCTCATACGCTATCCTGGGATTTGCCTTGTCTGAAGCTATGGGTCTCTTTTGTTTGATGGTTG
CTTTCTTGATCTTGTTTGCCATGTAA

Library Parental gene expression (RPM)
SRP017611_brain 99 .96 RPM
SRP017611_kidney 274 .39 RPM
SRP017611_liver 154 .61 RPM
SRP040447_lung 74 .12 RPM
SRP040447_skeletal_muscle 369 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012367 ortholog_one2one 1 retrogene
retro_amel_1829,
Canis familiaris ENSCAFG00000013366 ortholog_one2one 2 retrogenes
retro_cfam_4, retro_cfam_5,
Choloepus hoffmanni ENSCHOG00000012592 ortholog_one2one 3 retrogenes
retro_chof_189, retro_chof_2561, retro_chof_508,
Callithrix jacchus ENSCJAG00000008207 possible_ortholog 3 retrogenes
retro_cjac_279, retro_cjac_38, retro_cjac_4183,
Cavia porcellus ENSCPOG00000009017 within_species_paralog 2 retrogenes
retro_cpor_43, retro_cpor_550,
Cavia porcellus ENSCPOG00000022889 within_species_paralog 3 retrogenes
retro_cpor_1495, retro_cpor_268, retro_cpor_492,
Dasypus novemcinctus ENSDNOG00000010440 ortholog_one2one 2 retrogenes
retro_dnov_235, retro_dnov_396,
Loxodonta africana ENSLAFG00000010768 ortholog_one2one 1 retrogene
retro_lafr_120,
Myotis lucifugus ENSMLUG00000012822 ortholog_one2many 1 retrogene
retro_mluc_23,
Macaca mulatta ENSMMUG00000003954 ortholog_one2many 1 retrogene
retro_mmul_148,
Monodelphis domestica ENSMODG00000009520 ortholog_one2many 3 retrogenes
retro_mdom_1070, retro_mdom_295, retro_mdom_545,
Mustela putorius furo ENSMPUG00000013986 ortholog_one2one 1 retrogene
retro_mputfur_818,
Oryctolagus cuniculus ENSOCUG00000012164 ortholog_one2one 1 retrogene
retro_ocun_949,
Otolemur garnettii ENSOGAG00000027578 ortholog_one2one 1 retrogene
retro_ogar_1938,
Rattus norvegicus ENSRNOG00000001596 ortholog_one2one 1 retrogene
retro_rnor_1106,
Sorex araneus ENSSARG00000006733 ortholog_one2one 1 retrogene
retro_sara_82,
Ictidomys tridecemlineatus ENSSTOG00000013572 ortholog_one2one 4 retrogenes
retro_itri_1091, retro_itri_1236, retro_itri_324, retro_itri_438,
Tupaia belangeri ENSTBEG00000012159 ortholog_one2many 1 retrogene
retro_tbel_54,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_479 68.97 80.14
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Download FASTA sequences of all ENSCPOG00000006194 retrocopies