Parental gene:

PAM16, ENSCJAG00000019772

Aliases:None
Description:presequence translocase-associated motor 16 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:29679]
Organism:Marmoset (Callithrix jacchus)
Coordinates:12:4392851..4400877(-)


>ENSCJAG00000019772
ATGGCCAAGTACCTGGCGCAGATCATCGTGATGGGCGTGCAGGTGGTGGGCAGGGCCTTTGCACGGGCCTTGCGGCAGGA
GTTTGCAGCCAGCCGGGCCGCAGCTGATGCCCGAGGACGCGCTGGACACCGCTCTGCAGCAGCTTCCAACCTCTCTGGCC
TCAGCCTCCAGGAGGCACAGCAAATTCTCAACGTGTCCAAGCTGAGCCCCGAGGAGGTCCAGAAGAACTATGAACACTTA
TTTAAGGTGAATGACAAATCCGTTGGTGGCTCCTTCTACCTGCAGTCAAAGGTGGTCCGCGCAAAGGAACGCCTGGATGA
GGAACTCAGAATCCAGGCCCAGGAGGACAGAGAAGGGCGGACGCCCCACACGTGA

Library Parental gene expression (RPM)
SRP051959_colon 2 .11 RPM
SRP051959_heart 4 .35 RPM
SRP051959_kidney 3 .19 RPM
SRP051959_liver 5 .20 RPM
SRP051959_lung 2 .49 RPM
SRP051959_lymph_node 1 .71 RPM
SRP051959_skeletal_muscle 9 .15 RPM
SRP051959_spleen 2 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009200 ortholog_one2one 1 retrogene
retro_btau_1664,
Canis familiaris ENSCAFG00000019226 ortholog_one2one 1 retrogene
retro_cfam_1967,
Dasypus novemcinctus ENSDNOG00000010921 ortholog_one2many 2 retrogenes
retro_dnov_1361, retro_dnov_8,
Dipodomys ordii ENSDORG00000014888 ortholog_one2one 1 retrogene
retro_dord_81,
Equus caballus ENSECAG00000019387 ortholog_one2one 1 retrogene
retro_ecab_302,
Erinaceus europaeus ENSEEUG00000007432 ortholog_one2one 7 retrogenes
retro_eeur_138, retro_eeur_171, retro_eeur_213, retro_eeur_234, retro_eeur_273, retro_eeur_440, retro_eeur_673,
Echinops telfairi ENSETEG00000006416 ortholog_one2one 1 retrogene
retro_etel_2070,
Felis catus ENSFCAG00000027971 ortholog_one2one 1 retrogene
retro_fcat_520,
Myotis lucifugus ENSMLUG00000008921 ortholog_one2one 6 retrogenes
retro_mluc_2446, retro_mluc_2447, retro_mluc_2448, retro_mluc_2516, retro_mluc_2517, retro_mluc_429,
Mus musculus ENSMUSG00000014301 ortholog_one2many 1 retrogene
retro_mmus_73,
Rattus norvegicus ENSRNOG00000004608 ortholog_one2one 1 retrogene
retro_rnor_713,
Sus scrofa ENSSSCG00000007947 ortholog_one2many 2 retrogenes
retro_sscr_1090, retro_sscr_468,
Ictidomys tridecemlineatus ENSSTOG00000003461 ortholog_one2one 1 retrogene
retro_itri_1732,
Tupaia belangeri ENSTBEG00000001347 ortholog_one2one 1 retrogene
retro_tbel_3190,
Tarsius syrichta ENSTSYG00000009306 ortholog_one2one 1 retrogene
retro_tsyr_282,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1148 64.00 60.48
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Download FASTA sequences of all ENSCJAG00000019772 retrocopies