Parental gene:

C11orf58, ENSCJAG00000009626

Aliases:None
Description:chromosome 11 open reading frame 58 [Source:HGNC Symbol;Acc:16990]
Organism:Marmoset (Callithrix jacchus)
Coordinates:11:80299514..80316201(+)


>ENSCJAG00000009626
ATGAGTGCTGCCAGAGAGTCTCACCCGCACGGGGTGAAGCGTTCAGCCTCCCCAGACGACGATCTGGGATCTAGCAATTG
GGAGGCAGCAGACTTGGGTAATGAAGAGAGAAAACAAAAGTTCTTGAGACTTATGGGTGCAGGAAAGAAAGAACATACTG
GTCGTCTTGTTATAGGAGATCACAAGTCAACATCTCACTTCCGAACAGGGGAAGAAGACAAGAAAATTAATGAAGAACTG
GAGTCTCAATATCAGCAAAGTATGGACAGTAAATTATCAGGAAGATATCGGCGACATTGTGGACTTGGCTTCAGTGAGGT
AGAAGATCATGATGGAGAAGGTGATGTGGCTGGAGATGATGATGACGACGATGATGATTCACCTGATCCTGAAAGTCCAG
ATGACTCTGAAAGCGATTCAGAGTCAGAGAAAGAAGAATCCACTGAAGAACTCCAAGCTGCTGAGCACCCTGATGAAGTG
GAGGATCCCAAAAACAAAAAAGATGCAAAAAGCAATTATAAAATGATGTTTGTTAAATCCAGTGGTTCATAA

Library Parental gene expression (RPM)
SRP051959_colon 33 .81 RPM
SRP051959_heart 44 .48 RPM
SRP051959_kidney 46 .46 RPM
SRP051959_liver 42 .43 RPM
SRP051959_lung 47 .39 RPM
SRP051959_lymph_node 38 .65 RPM
SRP051959_skeletal_muscle 37 .39 RPM
SRP051959_spleen 46 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000030220 ortholog_one2many 2 retrogenes
retro_cfam_160, retro_cfam_717,
Cavia porcellus ENSCPOG00000009679 ortholog_one2one 2 retrogenes
retro_cpor_1331, retro_cpor_772,
Equus caballus ENSECAG00000011778 ortholog_one2one 1 retrogene
retro_ecab_269,
Felis catus ENSFCAG00000027747 ortholog_one2one 1 retrogene
retro_fcat_2016,
Homo sapiens ENSG00000110696 ortholog_one2one 2 retrogenes
retro_hsap_1408, retro_hsap_3898,
Macropus eugenii ENSMEUG00000011795 ortholog_one2one 1 retrogene
retro_meug_1432,
Myotis lucifugus ENSMLUG00000001589 ortholog_one2one 1 retrogene
retro_mluc_2604,
Monodelphis domestica ENSMODG00000007147 ortholog_one2one 2 retrogenes
retro_mdom_1249, retro_mdom_672,
Mus musculus ENSMUSG00000030663 ortholog_one2one 2 retrogenes
retro_mmus_2190, retro_mmus_2616,
Nomascus leucogenys ENSNLEG00000017719 ortholog_one2one 1 retrogene
retro_nleu_1425,
Otolemur garnettii ENSOGAG00000025335 ortholog_one2one 2 retrogenes
retro_ogar_1613, retro_ogar_2569,
Ochotona princeps ENSOPRG00000000154 ortholog_one2one 1 retrogene
retro_opri_761,
Pongo abelii ENSPPYG00000003458 ortholog_one2one 2 retrogenes
retro_pabe_1166, retro_pabe_3178,
Rattus norvegicus ENSRNOG00000020436 ortholog_one2one 1 retrogene
retro_rnor_622,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3098 56.41 62.84
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Download FASTA sequences of all ENSCJAG00000009626 retrocopies