Parental gene:

SUGT1, ENSCJAG00000003604

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:1:62350594..62388787(-)


>ENSCJAG00000003604
ATGGCGGCGGCTGCAGCAGGACCTGCAACATCCCGGAGATTTTTCCAGAGCTTCTCGGATGCTCTAATCGACGAGGACCC
CCAGGCGGCGTTAGAGGAGCTGACTAAGGCTTTGGAACAGAAACCAGATGATGCACAGTATTATTGTCAAAGAGCTTATT
GCCACATTCTTCTTGGGAATTACTGTGTTGCTGTTGCTGATGCAAAGAAGTCTCTCGAACTCAATCCAAATAATTCCACT
GCTATGTTGAGAAAAGGAATATGTGAATACCATGAAAAAAACTATGCTGCTGCTCTAGAAACTTTTATAGAAGGACAAAA
ATTAGATACCTTTTGGCATTTGAATTACCATAAACTTTACCATTACAAGATAGAGCTTTATCACAATTCTCTTTCTCCCT
TTTTTTTGAGACAATCTTGCTCTGTTGTTGGTGCAGATGCTAATTTCAGTGTCTGGATTAAAAGGTGTCAAGAAGCTCAG
AATGGCTCAGAATCTGAGGTGTGGATTCATCAGTCAAAAATCAAGTATGACTGGTATCAAACAGAATCTCAAGTAGTCAT
TACGCTTATGATCAAGAATGTTCAGAAGAATGACGTAAATGTGGAATTTTCAGAAAAACAGTTGTCTGCTTTGGTTAAAC
TTCCTTCTGGAGAGGATTACAATTTGAAACTGGAACTTCTTCATCCTATAATACCAGAACAGAGCACATTTAAAGTACTT
TCAACAAAGATTGAAATTAAACTGAAAAAGCCAGAGGCTGTGAGATGGGAAAAGCTAGAGGGGCAAGGAGATGTGCCTAC
GCCAAAACAATTCATAGCAGATGTAAAGAACCTATATCCATCATCATCTCCTTATACAAGAAATTGGGATAAATTGGTTG
GTGAGATAAAAGAAGAAGAAAAGAATGAAAAGTTGGAGGGAGATGCAGCCTTAAACAAATTATTTCAGCAGATCTATTCA
GATGGTTCTGATGAAGTGAAACGTGCCATGAACAAATCCTTTATGGAGTCTGGTGGTACAGTTTTGAGTACCAACTGGTC
TGATGTAGGTAAAAGGAAAGTTGAAATCAATCCTCCTGATGATATGGAATGGAAAAAGTACTAA

Library Parental gene expression (RPM)
SRP051959_colon 20 .79 RPM
SRP051959_heart 21 .00 RPM
SRP051959_kidney 21 .65 RPM
SRP051959_liver 20 .88 RPM
SRP051959_lung 24 .71 RPM
SRP051959_lymph_node 27 .03 RPM
SRP051959_skeletal_muscle 19 .22 RPM
SRP051959_spleen 27 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008606 ortholog_one2many 2 retrogenes
retro_amel_353, retro_amel_896,
Canis familiaris ENSCAFG00000004823 ortholog_many2many 1 retrogene
retro_cfam_136,
Cavia porcellus ENSCPOG00000003374 ortholog_many2many 1 retrogene
retro_cpor_110,
Dasypus novemcinctus ENSDNOG00000002991 ortholog_one2many 1 retrogene
retro_dnov_2621,
Homo sapiens ENSG00000165416 ortholog_one2many 1 retrogene
retro_hsap_2628,
Gorilla gorilla ENSGGOG00000006797 ortholog_one2many 1 retrogene
retro_ggor_1840,
Nomascus leucogenys ENSNLEG00000015700 ortholog_one2many 1 retrogene
retro_nleu_640,
Otolemur garnettii ENSOGAG00000008220 ortholog_many2many 1 retrogene
retro_ogar_41,
Pan troglodytes ENSPTRG00000005906 ortholog_one2many 1 retrogene
retro_ptro_1773,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_310 98.80 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCJAG00000003604 retrocopies