Parental gene:

CKS2, ENSCAFG00000002194

Aliases:None
Description:CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:2000]
Organism:Dog (Canis familiaris)
Coordinates:1:96928974..96932936(-)


>ENSCAFG00000002194
ATGGCCCACAAGCAGATCTACTACTCGGACAAGTACTTCGACGAGCACTACGAGTACCGGCATGTCATGTTACCCAGAGA
ACTTTCCAAACAAGTACCGAAAACCCATCTGATGTCTGAAGAGGAGTGGAGGAGACTTGGTGTCCAACAGAGTCTAGGCT
GGGTTCATTACATGATTCATGAGCCAGAACCACATATTCTTCTCTTTAGACGACCTCTTCCAAAAGAGCAACAAAAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 14 .78 RPM
SRP017611_brain 5 .00 RPM
SRP017611_kidney 13 .34 RPM
SRP017611_liver 1 .60 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007792 ortholog_one2many 1 retrogene
retro_cjac_261,
Dasypus novemcinctus ENSDNOG00000009427 ortholog_one2one 8 retrogenes
retro_dnov_1200, retro_dnov_1527, retro_dnov_195, retro_dnov_1984, retro_dnov_2530, retro_dnov_2532, retro_dnov_585, retro_dnov_755,
Erinaceus europaeus ENSEEUG00000004384 ortholog_one2one 7 retrogenes
retro_eeur_183, retro_eeur_255, retro_eeur_293, retro_eeur_551, retro_eeur_632, retro_eeur_639, retro_eeur_640,
Echinops telfairi ENSETEG00000001260 ortholog_one2one 10 retrogenes
retro_etel_1194, retro_etel_1752, retro_etel_1839, retro_etel_229, retro_etel_590, retro_etel_704, retro_etel_717, retro_etel_721, retro_etel_838, retro_etel_979,
Homo sapiens ENSG00000123975 ortholog_one2one 1 retrogene
retro_hsap_4183,
Macaca mulatta ENSMMUG00000012534 ortholog_one2one 1 retrogene
retro_mmul_269,
Nomascus leucogenys ENSNLEG00000008729 ortholog_one2one 1 retrogene
retro_nleu_1793,
Otolemur garnettii ENSOGAG00000028843 ortholog_one2one 1 retrogene
retro_ogar_798,
Ochotona princeps ENSOPRG00000007583 ortholog_one2one 3 retrogenes
retro_opri_111, retro_opri_1122, retro_opri_912,
Pongo abelii ENSPPYG00000025843 ortholog_one2many 1 retrogene
retro_pabe_57,
Pan troglodytes ENSPTRG00000021093 ortholog_one2one 1 retrogene
retro_ptro_2837,
Pteropus vampyrus ENSPVAG00000011011 ortholog_one2one 3 retrogenes
retro_pvam_1297, retro_pvam_1307, retro_pvam_605,
Rattus norvegicus ENSRNOG00000014130 ortholog_one2one 5 retrogenes
retro_rnor_1209, retro_rnor_1909, retro_rnor_2742, retro_rnor_279, retro_rnor_402,
Sorex araneus ENSSARG00000002443 ortholog_one2one 1 retrogene
retro_sara_213,
Sus scrofa ENSSSCG00000021161 ortholog_one2one 2 retrogenes
retro_sscr_458, retro_sscr_675,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_472 92.41 100.00
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2. retro_cfam_1495 88.75 100.00
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Download FASTA sequences of all ENSCAFG00000002194 retrocopies