Parental gene:

BT.79452, ENSBTAG00000018496

Aliases:None
Description:mitochondrial import inner membrane translocase subunit Tim17-B [Source:RefSeq peptide;Acc:NP_001039953]
Organism:Cow (Bos taurus)
Coordinates:X:92088347..92092138(-)


>ENSBTAG00000018496
ATGGAGGAGTATGCTCGGGAACCTTGCCCATGGAGAATTGTGGATGATTGCGGTGGAGCCTTCACTATGGGTGTTATCGG
CGGTGGAGTCTTCCAGGCCATTAAGGGCTTCCGCAATGCCCCTGTCGGAATGCGGCACCGATTGAGAGGCAGTGTCAATG
CTGTAAGGATCAGAGCCCCTCAGATTGGAGGTAGCTTCGCTGTGTGGGGGGGCCTATTTTCCACCATCGACTGCGGTCTG
GTGCGGCTTCGGGGCAAGGAAGATCCCTGGAACTCCATCACCAGTGGAGCACTGACCGGGGCTGTGCTGGCTGCCCGCAG
TGGCCCATTGGCCATGGTGGGCTCGGCAATGATGGGGGGCATCCTGTTGGCCCTCATCGAGGGTGTTGGCATCCTTCTCA
CTCGCTATACTGCCCAGCAGTTCCGCAATGCACCCCCATTCCTGGAGGACCCTGGCCAGCTGCCCTCTAAGGAGGGTACC
CCAGGCCCAGGCTACCCCAGCTATCAGCAGTACCACTGA

Library Parental gene expression (RPM)
ERP005899_liver 6 .13 RPM
ERP005899_muscle 26 .24 RPM
SRP017611_brain 11 .05 RPM
SRP017611_kidney 23 .00 RPM
SRP017611_liver 13 .21 RPM
SRP030211_testis 11 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012474 ortholog_one2one 1 retrogene
retro_amel_717,
Bos taurus ENSBTAG00000047059 within_species_paralog 3 retrogenes
retro_btau_1098, retro_btau_1590, retro_btau_872,
Cavia porcellus ENSCPOG00000008768 ortholog_one2one 2 retrogenes
retro_cpor_867, retro_cpor_893,
Dasypus novemcinctus ENSDNOG00000025897 ortholog_one2one 2 retrogenes
retro_dnov_2282, retro_dnov_2406,
Felis catus ENSFCAG00000002569 ortholog_one2one 2 retrogenes
retro_fcat_1429, retro_fcat_1654,
Gorilla gorilla ENSGGOG00000011427 ortholog_one2one 1 retrogene
retro_ggor_779,
Macropus eugenii ENSMEUG00000004174 ortholog_one2one 1 retrogene
retro_meug_2071,
Microcebus murinus ENSMICG00000005971 ortholog_one2one 3 retrogenes
retro_mmur_1128, retro_mmur_1272, retro_mmur_232,
Myotis lucifugus ENSMLUG00000009148 ortholog_one2many 1 retrogene
retro_mluc_148,
Macaca mulatta ENSMMUG00000004547 ortholog_one2one 1 retrogene
retro_mmul_796,
Mustela putorius furo ENSMPUG00000013675 ortholog_one2one 1 retrogene
retro_mputfur_1232,
Mus musculus ENSMUSG00000031158 ortholog_one2one 1 retrogene
retro_mmus_1509,
Nomascus leucogenys ENSNLEG00000007902 ortholog_one2one 1 retrogene
retro_nleu_1616,
Oryctolagus cuniculus ENSOCUG00000027418 ortholog_one2many 2 retrogenes
retro_ocun_121, retro_ocun_1451,
Pteropus vampyrus ENSPVAG00000007643 ortholog_one2one 1 retrogene
retro_pvam_470,
Ictidomys tridecemlineatus ENSSTOG00000014173 ortholog_one2one 1 retrogene
retro_itri_83,
Tarsius syrichta ENSTSYG00000010396 ortholog_one2one 2 retrogenes
retro_tsyr_1132, retro_tsyr_1703,
Vicugna pacos ENSVPAG00000009578 ortholog_one2one 1 retrogene
retro_vpac_92,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_882 87.50 59.88
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2. retro_btau_1022 65.14 96.51
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3. retro_btau_1550 54.29 79.07
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4. retro_btau_1552 63.58 91.86
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Download FASTA sequences of all ENSBTAG00000018496 retrocopies