Parental gene: | ORGLA05G0009300 |
| Aliases: | None |
| Description: | None |
| Organism: | African rice (Oryza glaberrima) |
| Coordinates: | 5:538955..541293(-) |
>ORGLA05G0009300
ATGGGTCACGGTGTCAGCTGCGCCCGCACCGGCGACGAGCACGACTTCTTCCGGGCGGCGCAGCTCGGCGACCTCGACGC
CCTGGCCGCCCTCCTCGCCGCCGACCCTTCCCTCGCCCGCCGCGCCACCCTCTACGACCGCCTCTCCGTCCTCCACATCG
CCGCCGCCAATGGCCGCATCGAGGTGCTCTCCATGTTCTTGGATCGCGGGGCGCCGCCGGACGCGGTGAATCGGCACAAG
CAGACGCCGCTGATGCTCGCGGCCATGCACGGCAAGATCGACTGCGTGCTCAAACTCCTCCAGGCCGACGCAAATATCTT
GATGTTCGACTCGGTGCACGCGAGGACCTGCCTCCACCACGCGGCGTACTACGGCCACGTCGACTGCCTGCAGGCCATCC
TCGCCGCCGCGCAGACCACGCCGGTGGCCGACTCATGGGGTTTCGCCCGGTTCGTCAACGTCAGGGACGACCACGGCGCC
ACGCCGCTGCATCTCGCGGCCAGGCAGGGGCGGCCGGGGTGCGTGCAGGTGTTGCTGGAGAACGGCGCCATTGTGTCGGC
TTTGACAGGATCATATGGCTTCCCTGGAAGCACGTCGCTTCATTTGGCTGCTCGTAGCGGGAACTTGGATTGCATCAGGA
AGCTGCTTGCCTGGGGAGCTGATCGGCTCCAAAGGGATTCGGCTGGGAGAATTCCCTATTCTGTTGCGCTGAAACGGAAC
CATGGAGCATGTGCAGCTTTGCTGAACCCTACATCAGCAGAGCCCATGGTGTGGCCATCCCCACTTAAGTTCATCAGTGA
GCTTGAACCAGAAGCTAAGGCTCTCCTGGAAGCAGCTCTGATGGAAGCCAACAGGGAGAGGGAGAAGAAAATCCTGAATG
GCACAAAGTACTCCCTGCCATCCCCTTCGCCCGGTGATGACAGTGCCGATGACGATGCATGCTCAGAGGTGAGCGACACG
GAGCTCTGCTGCATCTGCTTCGACCAGGCTTGCACCATTGAGGTGCAAGACTGTGGACATCAAATGTGTGCACCGTGCAC
GCTGGCACTGTGCTGTCACAACAAACCCAATCCGACGACCCTGACACCGCCCTCACCGGCCTGCCCATTCTGCCGGGGCA
GCATCTCACGGCTGGTGGTGGCCCAAACAAGGTCTGCTTGTGATCCTGACAAGCCGTCATCCCCGCAGCTCACCCGGAAG
CGGTCGCGTCGATCTCACAACCTCAGTGAGGGCAGCAGCAGCTTCAAAGGTCTATCTTCGGCCATGGGCTCCTTCTCAAA
GCTTGGCCGTGGCTCGAGCCGCATGGCGGACAGTGACAGCAGCAACCTGGACAAGCCTGAGCACGATCTATGA
ATGGGTCACGGTGTCAGCTGCGCCCGCACCGGCGACGAGCACGACTTCTTCCGGGCGGCGCAGCTCGGCGACCTCGACGC
CCTGGCCGCCCTCCTCGCCGCCGACCCTTCCCTCGCCCGCCGCGCCACCCTCTACGACCGCCTCTCCGTCCTCCACATCG
CCGCCGCCAATGGCCGCATCGAGGTGCTCTCCATGTTCTTGGATCGCGGGGCGCCGCCGGACGCGGTGAATCGGCACAAG
CAGACGCCGCTGATGCTCGCGGCCATGCACGGCAAGATCGACTGCGTGCTCAAACTCCTCCAGGCCGACGCAAATATCTT
GATGTTCGACTCGGTGCACGCGAGGACCTGCCTCCACCACGCGGCGTACTACGGCCACGTCGACTGCCTGCAGGCCATCC
TCGCCGCCGCGCAGACCACGCCGGTGGCCGACTCATGGGGTTTCGCCCGGTTCGTCAACGTCAGGGACGACCACGGCGCC
ACGCCGCTGCATCTCGCGGCCAGGCAGGGGCGGCCGGGGTGCGTGCAGGTGTTGCTGGAGAACGGCGCCATTGTGTCGGC
TTTGACAGGATCATATGGCTTCCCTGGAAGCACGTCGCTTCATTTGGCTGCTCGTAGCGGGAACTTGGATTGCATCAGGA
AGCTGCTTGCCTGGGGAGCTGATCGGCTCCAAAGGGATTCGGCTGGGAGAATTCCCTATTCTGTTGCGCTGAAACGGAAC
CATGGAGCATGTGCAGCTTTGCTGAACCCTACATCAGCAGAGCCCATGGTGTGGCCATCCCCACTTAAGTTCATCAGTGA
GCTTGAACCAGAAGCTAAGGCTCTCCTGGAAGCAGCTCTGATGGAAGCCAACAGGGAGAGGGAGAAGAAAATCCTGAATG
GCACAAAGTACTCCCTGCCATCCCCTTCGCCCGGTGATGACAGTGCCGATGACGATGCATGCTCAGAGGTGAGCGACACG
GAGCTCTGCTGCATCTGCTTCGACCAGGCTTGCACCATTGAGGTGCAAGACTGTGGACATCAAATGTGTGCACCGTGCAC
GCTGGCACTGTGCTGTCACAACAAACCCAATCCGACGACCCTGACACCGCCCTCACCGGCCTGCCCATTCTGCCGGGGCA
GCATCTCACGGCTGGTGGTGGCCCAAACAAGGTCTGCTTGTGATCCTGACAAGCCGTCATCCCCGCAGCTCACCCGGAAG
CGGTCGCGTCGATCTCACAACCTCAGTGAGGGCAGCAGCAGCTTCAAAGGTCTATCTTCGGCCATGGGCTCCTTCTCAAA
GCTTGGCCGTGGCTCGAGCCGCATGGCGGACAGTGACAGCAGCAACCTGGACAAGCCTGAGCACGATCTATGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA018946 | ortholog_one2one | 1 retrogene | |
| Leersia perrieri | LPERR05G00860 | ortholog_one2one | 1 retrogene | |
| Oryza barthii | OBART05G00890 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM05G00910 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI05G00950 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA05G00830 | ortholog_one2one | 1 retrogene | |
| Oryza punctata | OPUNC05G00800 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI05G00870 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS05G0112000 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogla_12 | 68.77 | 70.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ORGLA05G0009300 retrocopies