Parental gene:

OPUNC05G00800

Aliases:None
Description:None
Organism:Red rice (Oryza punctata)
Coordinates:5:611670..613997(-)


>OPUNC05G00800
ATGGGTCACGGTGTCAGCTGCGCCCGCACCGGCGACGAGCACGACTTCTTCCGCGCGGCGCAGCTCGGCGACCTCGACGC
CCTGGCCGCCCTCCTCGCCGCCGACCCTTCCCTCGCCCGCCGCGCCACCCTCTACGACCGCCTCTCCGTCCTCCACATCG
CCGCCGCCAATGGCCGCATCGAGGTGCTCTCCATGTTCTTGGATCGCGGGGCGCCGCCGGACGCGGTGAATCGACACAAG
CAGACGCCGCTGATGCTCGCGGCCATGCACGGCAAGATCGAGTGCGTGCTCAAGCTCCTCCAGGCCGGTGCAAATATCTT
GATGTTCGATTCGGTGCACGCGAGGACCTGCCTCCACCACGCGGCGTACTACGGCCACGTCGACTGCCTGCAGGCCATCA
TCTCCGCCGCGCAGACCACGCCGGTGGCCGACTCATGGGGTTTCGCCCGGTTCGTCAACGTCAGGGACGACCACGGCGCC
ACGCCGCTGCATCTCGCAGCCAGGCAGGGGCGGCCGGGGTGTGTGCAGGTGTTGCTGGAGAACGGCGCCATTGTGTCCGC
TTTGACCGGATCATATGGCTTCCCTGGAAGCACGTCGCTGCATTTGGCCGCTCGTAGCGGGAACTTGGATTGCATCAGGA
AGCTGCTTGCCTGGGGAGCTGATCGGCTCCAAAGGGATTCGGCTGGGAGAATTCCCTATTCTGTTGCACTGAAACGGAAC
CATGGAGCATGTGCAGCTTTGCTAAACCCTACATCAGCAGAGCCCATGGTGTGGCCGTCCCCACTTAAGTTCATCAGTGA
GCTTGAACCAGAAGCTAAGGCTCTCCTGGAAGCAGCTCTGATGGAAGCTAACAGGGAGAGGGAGAAGAAAATCCTGAATG
GCACAAAGTACTCCCTGCCATCCCCTTCGCCCGGTGATGACAGTGCCGATGACGATGCATGCTCAGAGGTGAGCGACACG
GAGCTCTGCTGCATCTGCTTCGACCAGGCTTGCACCATTGAGGTGCAAGACTGTGGACATCAAATGTGTGCACCGTGCAC
GCTGGCATTGTGCTGTCACAACAAACCCAATCCGACGACCCTGACACCGCCCTCACCGGCCTGCCCATTCTGCCGGGGCA
GCATCTCACGGCTGGTGGTGGCCCAAACAAGGTCTGCTTGTGATCCTGACAAGCCGTCATCCCCGCAGCTCACCCGGCGG
CGGTCTCGGCGATCTCACAACCTCAGTGAGGGAAGCAGCAGCTTCAAAGGGCTATCTTCGGCCATGGGCTCCTTCTCAAA
GCTTGGCCGTGGCTCTAGCCGCATGGCGGACAGTGACAGCAGCACCCTGGACAAGCCCGAGCATGATCTATGA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA018946 ortholog_one2one 1 retrogene
retro_oind_45,
Leersia perrieri LPERR05G00860 ortholog_one2one 1 retrogene
retro_lper_10,
Oryza barthii OBART05G00890 ortholog_one2one 1 retrogene
retro_obar_26,
Oryza glumaepatula OGLUM05G00910 ortholog_one2one 1 retrogene
retro_oglu_21,
Oryza meridionalis OMERI05G00950 ortholog_one2one 1 retrogene
retro_omer_12,
Oryza nivara ONIVA05G00830 ortholog_one2one 1 retrogene
retro_oniv_6,
Oryza glaberrima ORGLA05G0009300 ortholog_one2one 1 retrogene
retro_ogla_12,
Oryza rufipogon ORUFI05G00870 ortholog_one2one 1 retrogene
retro_oruf_36,
Oryza sativa japonica OS05G0112000 ortholog_one2one 1 retrogene
retro_osat_41,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opun_25 71.61 70.00
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Download FASTA sequences of all OPUNC05G00800 retrocopies