Parental gene:

RPL27A, ENSTSYG00000013207

Aliases:None
Description:ribosomal protein L27a [Source:HGNC Symbol;Acc:10329]
Organism:Tarsier (Tarsius syrichta)
Coordinates:scaffold_33907:14440..18237(+)


>ENSTSYG00000013207
ATGCCATCCAGACTGAGGAAGACCCGGAAACTTCGGGGCCACGTGAGTCACGGCCACGGCCGTATCGGCAAGCACCGAAA
GCACCCCGGAGGCCGTGGTAATGCTGGTGGCTTGCATCACCACAGGATCAATTTCGACAAATATCACCCAGGATATTTTG
GGAAAGTTGGTATGAGGCATTACCATTTAAAGAGGAACCAGAGCTTCTGCCCAACTGTCAACCTTGATAAATTGTGGACT
TTGGTCAGTGAGCAGACAAGGGTGAATGCTGCTAAAAATAAGACCGGAGCTGCTCCCATCATTGATGTGGTGCGATCGGG
CTACTACAAAGTTCTGGGAAAGGGAAAGCTCCCAAAGCAGCCTGTCATCGTGAAAGCCAAATTCTTCAGCAGAAGAGCTG
AGGAGAAGATTAAGGGTGTGGGGGGAGCCTGTGTCCTGGTGGCTTGA

Species Parental gene accession Homology type Retrogenes number
Ficedula albicollis ENSFALG00000000924 possible_ortholog 1 retrogene
retro_falb_20,
Homo sapiens ENSG00000166441 ortholog_one2one 7 retrogenes
retro_hsap_1263, retro_hsap_1908, retro_hsap_2352, retro_hsap_239, retro_hsap_3335, retro_hsap_3586, retro_hsap_3682,
Gorilla gorilla ENSGGOG00000001660 ortholog_one2many 2 retrogenes
retro_ggor_155, retro_ggor_1785,
Myotis lucifugus ENSMLUG00000016616 possible_ortholog 7 retrogenes
retro_mluc_113, retro_mluc_1253, retro_mluc_164, retro_mluc_2123, retro_mluc_2202, retro_mluc_47, retro_mluc_572,
Macaca mulatta ENSMMUG00000021828 ortholog_one2many 2 retrogenes
retro_mmul_207, retro_mmul_268,
Monodelphis domestica ENSMODG00000007480 possible_ortholog 1 retrogene
retro_mdom_575,
Mus musculus ENSMUSG00000046364 possible_ortholog 1 retrogene
retro_mmus_40,
Nomascus leucogenys ENSNLEG00000017535 ortholog_one2many 1 retrogene
retro_nleu_102,
Pan troglodytes ENSPTRG00000003333 ortholog_one2many 1 retrogene
retro_ptro_33,
Rattus norvegicus ENSRNOG00000014214 possible_ortholog 10 retrogenes
retro_rnor_132, retro_rnor_193, retro_rnor_1996, retro_rnor_2466, retro_rnor_253, retro_rnor_261, retro_rnor_334, retro_rnor_370, retro_rnor_565, retro_rnor_606,
Tupaia belangeri ENSTBEG00000000046 possible_ortholog 20 retrogenes
retro_tbel_1093, retro_tbel_1101, retro_tbel_1148, retro_tbel_1152, retro_tbel_1223, retro_tbel_1338, retro_tbel_1639, retro_tbel_2017, retro_tbel_2606, retro_tbel_2777, retro_tbel_298, retro_tbel_3111, retro_tbel_3496, retro_tbel_3881, retro_tbel_4566, retro_tbel_460, retro_tbel_544, retro_tbel_643, retro_tbel_925, retro_tbel_937,
Taeniopygia guttata ENSTGUG00000008355 possible_ortholog 1 retrogene
retro_tgut_18,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tsyr_50 75.33 99.32
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2. retro_tsyr_155 73.51 100.00
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3. retro_tsyr_170 84.67 100.00
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4. retro_tsyr_187 70.92 95.27
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5. retro_tsyr_204 84.67 100.00
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6. retro_tsyr_283 87.25 99.32
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7. retro_tsyr_498 91.22 100.00
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8. retro_tsyr_550 76.51 98.65
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9. retro_tsyr_608 75.49 67.57
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10. retro_tsyr_612 84.48 78.38
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11. retro_tsyr_716 90.60 100.00
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12. retro_tsyr_1103 81.20 79.05
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13. retro_tsyr_1591 89.90 66.22
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14. retro_tsyr_1607 95.30 100.00
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15. retro_tsyr_1623 85.47 78.38
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16. retro_tsyr_1725 60.66 81.76
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Download FASTA sequences of all ENSTSYG00000013207 retrocopies