Parental gene: | HSD17B10, ENSTSYG00000005340 |
| Aliases: | None |
| Description: | hydroxysteroid (17-beta) dehydrogenase 10 [Source:HGNC Symbol;Acc:4800] |
| Organism: | Tarsier (Tarsius syrichta) |
| Coordinates: | GeneScaffold_5397:8566..10941(-) |
>ENSTSYG00000005340
ATGGCTGCGGCGTTGCGAAATGTGCAGGGTTTGGTCGCAGTAATAACCGGAGGAGCCTCGGGCCTGGGCCTGGCCACGGT
GGAGCGACTGGTGAGACAGGGGGCTGCTGCTGTGCTTCTGGACCTGCCCAACTCGGGCGGGGAGGCCCAGGCCAAGAAGT
TTGGAAAGAGCTGCGTCTTTGCCCCAGCCGACGTGACATCTGAGAAAGATGTGCAAGCAGCCCTGACTCTAGCAAAAGAA
AAATTTGGCCGTGTGGATGTGGCTGTCAACTGTGCAGGCATTGCAGTGGCCATCAAGACATACAACTTAAAGAAGAGCCA
GGCTCATACCTTAGATGACTTCCAGCGAGTTCTCAATGTGAATCTCTTAGGCACCTTCAATATGATCCGCCTGGTAGCTG
GTGAGATGGGCCAGAATGAACCAGACCAGGGAGGCCAACGTGGGGTCATCATCAACACTGCCAGTGTGGCTGCCTTCGAG
GGCCAGGTTGGACAAGCTGCATACTCTGCTTCCAAGGGAGGCATAGTGGGCATGACACTGCCCATTGCTCGGGATCTGGC
TCCCATAGGCATCCGGGTGATGACCATTGCTCCAGGTCTATTTGGCACCCCACTGCTGACCAGCCTCCCAGAGAAGGTGC
GCAACTTCTTGGCCAGCCAAGTGCCCTTCCCCAACCGACTGGGTGATCCTGCTGAGTATGCGCACCTGGTACAGGCCATC
ATCGAGAACCCATTCCTCAATGGGGAGGTCATCCGACTGGATGGAGCCATCCGCATGCAGCCTTGA
ATGGCTGCGGCGTTGCGAAATGTGCAGGGTTTGGTCGCAGTAATAACCGGAGGAGCCTCGGGCCTGGGCCTGGCCACGGT
GGAGCGACTGGTGAGACAGGGGGCTGCTGCTGTGCTTCTGGACCTGCCCAACTCGGGCGGGGAGGCCCAGGCCAAGAAGT
TTGGAAAGAGCTGCGTCTTTGCCCCAGCCGACGTGACATCTGAGAAAGATGTGCAAGCAGCCCTGACTCTAGCAAAAGAA
AAATTTGGCCGTGTGGATGTGGCTGTCAACTGTGCAGGCATTGCAGTGGCCATCAAGACATACAACTTAAAGAAGAGCCA
GGCTCATACCTTAGATGACTTCCAGCGAGTTCTCAATGTGAATCTCTTAGGCACCTTCAATATGATCCGCCTGGTAGCTG
GTGAGATGGGCCAGAATGAACCAGACCAGGGAGGCCAACGTGGGGTCATCATCAACACTGCCAGTGTGGCTGCCTTCGAG
GGCCAGGTTGGACAAGCTGCATACTCTGCTTCCAAGGGAGGCATAGTGGGCATGACACTGCCCATTGCTCGGGATCTGGC
TCCCATAGGCATCCGGGTGATGACCATTGCTCCAGGTCTATTTGGCACCCCACTGCTGACCAGCCTCCCAGAGAAGGTGC
GCAACTTCTTGGCCAGCCAAGTGCCCTTCCCCAACCGACTGGGTGATCCTGCTGAGTATGCGCACCTGGTACAGGCCATC
ATCGAGAACCCATTCCTCAATGGGGAGGTCATCCGACTGGATGGAGCCATCCGCATGCAGCCTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000005036 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000016277 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000000939 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000009594 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000004051 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000005080 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000013899 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000008565 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000175 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000002951 | ortholog_one2one | 1 retrogene | |
| Xenopus tropicalis | ENSXETG00000007721 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tsyr_1000 | 69.03 | 58.24 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tsyr_1542 | 70.83 | 63.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tsyr_2078 | 71.26 | 63.60 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTSYG00000005340 retrocopies