Parental gene:

HSD17B10, ENSFCAG00000013899

Aliases:None
Description:hydroxysteroid (17-beta) dehydrogenase 10 [Source:HGNC Symbol;Acc:4800]
Organism:Cat (Felis catus)
Coordinates:X:45234960..45237422(-)


>ENSFCAG00000013899
ATGGCTGCGGCATGTCGGACTGTGAAGGGCCTAGTTGCTCTAATAACCGGAGGAGCCTCTGGTCTGGGTCTGGCCACGGC
GGAGCGACTGGTGGGGCAAGGGGCCACTGCTGTGCTTCTGGACCTGCCTAACTCCGATGGGGAGGTCCAAGCCAAGAAGT
TAGGGAAGAGTTGCGTCTTTGCCCCAGCTGACGTGACCTCAGAGAAGGACGTGCAAGCAGCCCTGACTCTAGCAAGAGAA
AAGTTTGGCCGTGTGGATGTGGCAGTCAACTGTGCAGGCATTGCAGTGGCTATGAAGACATACAACTTAAAGAAGAATCA
GGCCCATACTTTGGAGGACTTCCAGCGAGTTCTTAATGTGAATCTCATGGGCACCTTCAATGTGATCCGCCTGGTGGCTG
GTGAGATGGGCCAGAATGAACCAGATCAGGGAGGCCAACGCGGGGTCATCATCAACACTGCCAGCGTGGCTGCCTTTGAG
GGCCAGGTTGGACAAGCTGCATACTCTGCTTCCAAGGGGGGCATAGTGGGCATGACACTGCCCATTGCTCGGGATCTGGC
TCCCATGGGCATCCGAGTGATGACCATTGCTCCAGGCCTATTTGGTACCCCACTGCTGACCAGCCTCCCAGAAAAAGTGC
GCAACTTCTTGGCCAGCCAGGTGCCCTTCCCCAGCCGCCTGGGTGACCCTGCTGAGTATGCTCATCTGGTACAAGCCATC
ATCGAAAACCCATTCATCAACGGAGAGGTCATCCGGCTAGATGGGGCCATCCGCATGCAGCCTTGA

Library Parental gene expression (RPM)
SRP017611_liver 27 .09 RPM
SRP017611_kidney 50 .50 RPM
SRP017611_brain 16 .30 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000005036 ortholog_one2one 1 retrogene
retro_amel_371,
Canis familiaris ENSCAFG00000016277 ortholog_one2one 1 retrogene
retro_cfam_545,
Choloepus hoffmanni ENSCHOG00000000939 ortholog_one2many 1 retrogene
retro_chof_582,
Cavia porcellus ENSCPOG00000009594 ortholog_one2one 1 retrogene
retro_cpor_535,
Dipodomys ordii ENSDORG00000004051 ortholog_one2one 1 retrogene
retro_dord_532,
Erinaceus europaeus ENSEEUG00000005080 ortholog_one2one 1 retrogene
retro_eeur_379,
Felis catus ENSFCAG00000030280 within_species_paralog 1 retrogene
retro_fcat_885,
Macropus eugenii ENSMEUG00000008565 ortholog_one2one 1 retrogene
retro_meug_2184,
Myotis lucifugus ENSMLUG00000000175 ortholog_one2many 1 retrogene
retro_mluc_4,
Otolemur garnettii ENSOGAG00000002951 ortholog_one2one 1 retrogene
retro_ogar_1823,
Tarsius syrichta ENSTSYG00000005340 ortholog_one2one 3 retrogenes
retro_tsyr_1000, retro_tsyr_1542, retro_tsyr_2078,
Xenopus tropicalis ENSXETG00000007721 ortholog_one2one 1 retrogene
retro_xtro_39,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1827 75.48 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSFCAG00000013899 retrocopies