Parental gene: | EDF1, ENSTBEG00000014060 |
| Aliases: | None |
| Description: | endothelial differentiation-related factor 1 [Source:HGNC Symbol;Acc:3164] |
| Organism: | Treeshrew (Tupaia belangeri) |
| Coordinates: | scaffold_147090:1371..2816(+) |
>ENSTBEG00000014060
GCCATCTTAGCGGCCCAGCGACGGGGAGAGGACGTGGAGACTTCCAAAAAATGGGCCGCGGGGCAGAACAAGCAGCACGC
CATCACCAAGAACACGGCCAAGCTGGACCGCGAGACGGAGGAGCTACACCATGACAGGGTGCCCCTGGAGGTGGGCAAGG
TGATCCAGCAGGGCCGGCAGAGCAAGGGGCTGACGCAGAAGGACCTGGCCACGAAAATCAATGAAAAGCCTCAAGTCATT
GCGGACTACGAGAGCGGACGGGCCATCCCAAACAACCAGGTTCTGGGCAAAATCGAGAGGGCCATCGGCCTCAAGCTCCG
AGGGAAGGACATCGGGAAGCCCATCGAGAAGGGGCCCCGGGCGAAGTGA
GCCATCTTAGCGGCCCAGCGACGGGGAGAGGACGTGGAGACTTCCAAAAAATGGGCCGCGGGGCAGAACAAGCAGCACGC
CATCACCAAGAACACGGCCAAGCTGGACCGCGAGACGGAGGAGCTACACCATGACAGGGTGCCCCTGGAGGTGGGCAAGG
TGATCCAGCAGGGCCGGCAGAGCAAGGGGCTGACGCAGAAGGACCTGGCCACGAAAATCAATGAAAAGCCTCAAGTCATT
GCGGACTACGAGAGCGGACGGGCCATCCCAAACAACCAGGTTCTGGGCAAAATCGAGAGGGCCATCGGCCTCAAGCTCCG
AGGGAAGGACATCGGGAAGCCCATCGAGAAGGGGCCCCGGGCGAAGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000013266 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000019544 | ortholog_one2one | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000011166 | ortholog_one2many | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000009565 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000026812 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000015037 | possible_ortholog | 7 retrogenes | |
| Microcebus murinus | ENSMICG00000016498 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000005051 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000017329 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000011008 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000015092 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000016272 | ortholog_one2one | 4 retrogenes | |
| Sorex araneus | ENSSARG00000007191 | possible_ortholog | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000002668 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_tbel_967 | 77.14 | 85.25 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_tbel_1404 | 79.57 | 76.23 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_tbel_1950 | 81.37 | 83.61 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_tbel_3538 | 77.55 | 80.33 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTBEG00000014060 retrocopies