Parental gene:

ENSTBEG00000007272

Aliases:None
Description:None
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_5121:8514..10032(+)


>ENSTBEG00000007272
GCCGTGGGGAAGACGTGCCTCCTGATCAGCTACACGACCAACGCCTTCCCGGGAGAGTACATCCCCACCGTTTTCGACAA
CTACTCTGCCAACGTCATGGTGGACGGGAAGCCTGTGAACCTCGGACTGTGGGACACTGCAGGGCAGGAAGATTACGACC
GGCTGCGGCCACTCTCCTATCCCCAGACTGATGTCTTTCTGATCTGCTTCTCCCTGGTGAGCCCGGCCTCCTTCGAGAAC
GTCCGTGCCAAGTACCCGGTGCGGCACCACTGCCCACACACGCCCATCCTCCTGGGCACAAAACTGGACCTCCGTGACGA
CAAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017364 possible_ortholog 1 retrogene
retro_amel_1104,
Bos taurus ENSBTAG00000009233 possible_ortholog 2 retrogenes
retro_btau_1601, retro_btau_332,
Canis familiaris ENSCAFG00000015716 possible_ortholog 1 retrogene
retro_cfam_496,
Callithrix jacchus ENSCJAG00000018194 possible_ortholog 1 retrogene
retro_cjac_2687,
Cavia porcellus ENSCPOG00000013861 possible_ortholog 1 retrogene
retro_cpor_18,
Echinops telfairi ENSETEG00000012902 possible_ortholog 3 retrogenes
retro_etel_1565, retro_etel_1645, retro_etel_42,
Felis catus ENSFCAG00000011361 possible_ortholog 2 retrogenes
retro_fcat_1632, retro_fcat_717,
Felis catus ENSFCAG00000011671 possible_ortholog 1 retrogene
retro_fcat_431,
Homo sapiens ENSG00000136238 possible_ortholog 6 retrogenes
retro_hsap_1256, retro_hsap_1925, retro_hsap_28, retro_hsap_3036, retro_hsap_3072, retro_hsap_4910,
Gorilla gorilla ENSGGOG00000026733 possible_ortholog 2 retrogenes
retro_ggor_2110, retro_ggor_217,
Loxodonta africana ENSLAFG00000012844 possible_ortholog 1 retrogene
retro_lafr_818,
Macropus eugenii ENSMEUG00000006196 possible_ortholog 1 retrogene
retro_meug_201,
Myotis lucifugus ENSMLUG00000009701 possible_ortholog 1 retrogene
retro_mluc_1059,
Macaca mulatta ENSMMUG00000021075 possible_ortholog 4 retrogenes
retro_mmul_1310, retro_mmul_1964, retro_mmul_2642, retro_mmul_721,
Mus musculus ENSMUSG00000001847 possible_ortholog 2 retrogenes
retro_mmus_1372, retro_mmus_234,
Oryctolagus cuniculus ENSOCUG00000009956 possible_ortholog 1 retrogene
retro_ocun_305,
Otolemur garnettii ENSOGAG00000012467 possible_ortholog 1 retrogene
retro_ogar_2140,
Oreochromis niloticus ENSONIG00000017151 possible_ortholog 1 retrogene
retro_onil_34,
Procavia capensis ENSPCAG00000009949 possible_ortholog 1 retrogene
retro_pcap_16,
Pongo abelii ENSPPYG00000008763 possible_ortholog 2 retrogenes
retro_pabe_1047, retro_pabe_2546,
Pan troglodytes ENSPTRG00000018910 possible_ortholog 4 retrogenes
retro_ptro_1288, retro_ptro_3044, retro_ptro_3274, retro_ptro_36,
Rattus norvegicus ENSRNOG00000001068 possible_ortholog 1 retrogene
retro_rnor_230,
Ictidomys tridecemlineatus ENSSTOG00000006784 possible_ortholog 1 retrogene
retro_itri_1503,
Tupaia belangeri ENSTBEG00000002614 other_paralog 17 retrogenes
retro_tbel_1091, retro_tbel_1379, retro_tbel_1697, retro_tbel_1711, retro_tbel_183, retro_tbel_2320, retro_tbel_2447, retro_tbel_2721, retro_tbel_4016, retro_tbel_4168, retro_tbel_4184, retro_tbel_4273, retro_tbel_4427, retro_tbel_584, retro_tbel_585, retro_tbel_860, retro_tbel_873,
Takifugu rubripes ENSTRUG00000004543 possible_ortholog 1 retrogene
retro_trub_12,
Takifugu rubripes ENSTRUG00000016201 possible_ortholog 1 retrogene
retro_trub_15,
Tarsius syrichta ENSTSYG00000001618 possible_ortholog 2 retrogenes
retro_tsyr_2027, retro_tsyr_2068,
Xenopus tropicalis ENSXETG00000027593 possible_ortholog 1 retrogene
retro_xtro_1,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_9 76.34 84.26
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2. retro_tbel_1796 91.67 87.04
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3. retro_tbel_2564 73.91 81.48
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4. retro_tbel_4296 80.56 97.22
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Download FASTA sequences of all ENSTBEG00000007272 retrocopies