Parental gene:

RPLP0, ENSTBEG00000005498

Aliases:None
Description:ribosomal protein, large, P0 [Source:HGNC Symbol;Acc:10371]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_2433:273422..276772(-)


>ENSTBEG00000005498
ATGCCCAGGGAAGACAGGGCGACCTGGAAGTCCAACTACTTCCTTAAGATAATCCAACTTCTGGATGATTATCCAAAATG
CTTCATCGTGGGCGCAGACAATGTGGGCTCCAAGCAGATGCAGCAGATCCGCATGTCCCTCCGCGGGAAGGCCGTGGTGC
TGATGGGCAAGAACACCATGATGCGCAAGGCCATCCGGGGGCATCTGGAAAACAACCCAGCTCTGGAGAAGCTGTTGCCT
CACATCCGGGGGAATGTGGGCTTCGTGTTCACCAAGGAGGACCTCACTGAGATCAGGGACATGTTGCTGGCCAACAAGGT
TCCAGCTGCTGCCCGTGCTGGTGCCATTGCCCCTTGCGAAGTCACTGTGCCAGCCCAGAACACTGGTCTGGGGCCCGAGA
AGACCTCCTTCTTCCAGGCTTTGGGCATCACCACTAAGATCTCCAGGGGCACCATTGAAATCCTGAGCGATGTGCAGCTG
ATAAAGACTGGAGACAAGGTGGGAGCCAGCGAAGCCACACTGCTGAACATGCTGAACATCTCCCCCTTCTCCTTCGGGCT
GATCATCCAGCAGGTGTTTGACAATGGCAGCATCTACAACCCTGAAGTGCTTGACATCACAGAGGAGGCTCTGCATTCTC
GCTTCCTGGAGGGTGTCCGCAATGTTGCCAGTGTGTGCCTGCAGATCGGCTATCCCACTGTCGCTTCAGTGCCACATTCT
ATCATCAATGGGTACAAGCGGGTCCTGGCTTTGTCTGTGGAGACTGACTACACCTTCCCACTTGCTGAGAAGGTCAAGGC
CTTCTTGGCTGATCCATCTGCATTTGTGGCTGCCGCCCCCGTGGCCGCTGCCACCACTGCTGCTCCTGCTGCTGCCGCGG
CCCCAGCCAAGGTTGAAGCCAAGGAAGAGTCAGAGGAGTCGGACGAGGATATGGGATTTGGTCTCTTTGACTGA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000002745 ortholog_one2one 2 retrogenes
retro_chof_1115, retro_chof_2341,
Callithrix jacchus ENSCJAG00000008677 possible_ortholog 3 retrogenes
retro_cjac_1693, retro_cjac_2840, retro_cjac_786,
Cavia porcellus ENSCPOG00000021812 ortholog_one2one 5 retrogenes
retro_cpor_298, retro_cpor_449, retro_cpor_475, retro_cpor_498, retro_cpor_601,
Erinaceus europaeus ENSEEUG00000007553 ortholog_one2one 1 retrogene
retro_eeur_612,
Gorilla gorilla ENSGGOG00000026582 possible_ortholog 5 retrogenes
retro_ggor_1088, retro_ggor_1771, retro_ggor_472, retro_ggor_649, retro_ggor_650,
Macaca mulatta ENSMMUG00000009157 possible_ortholog 2 retrogenes
retro_mmul_2245, retro_mmul_939,
Mus musculus ENSMUSG00000067274 ortholog_one2many 2 retrogenes
retro_mmus_143, retro_mmus_2249,
Oryctolagus cuniculus ENSOCUG00000005749 possible_ortholog 2 retrogenes
retro_ocun_293, retro_ocun_376,
Otolemur garnettii ENSOGAG00000003843 possible_ortholog 4 retrogenes
retro_ogar_2184, retro_ogar_2294, retro_ogar_556, retro_ogar_713,
Petromyzon marinus ENSPMAG00000001339 ortholog_one2many 1 retrogene
retro_pmar_6,
Pongo abelii ENSPPYG00000005022 possible_ortholog 5 retrogenes
retro_pabe_2113, retro_pabe_3035, retro_pabe_568, retro_pabe_66, retro_pabe_749,
Rattus norvegicus ENSRNOG00000001148 ortholog_one2many 3 retrogenes
retro_rnor_1350, retro_rnor_2092, retro_rnor_2970,
Sarcophilus harrisii ENSSHAG00000001623 possible_ortholog 2 retrogenes
retro_shar_286, retro_shar_413,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_3323 91.17 100.00
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Download FASTA sequences of all ENSTBEG00000005498 retrocopies