Parental gene: | ENSSTOG00000026103 |
| Aliases: | None |
| Description: | None |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393647.1:827817..832903(-) |
>ENSSTOG00000026103
ATGGCCGGACATCTGGCTTCGGACTTTGCCTTCTCGCCCCCTCCGGGCGGTGGGGGTGATGGGCCAGGAGGGCCGGAGCC
GGGCTGGATTGACCATCGGACCTGGCTAAGCTTCCCAGGCCCTCCCGGTGGTCCAGTAATCGGGCCAGGAGTTGGGCCAG
GTTCGGAGGTGTGGGGGATTCCCTCATATCCTCCGCCCCATGAGTTCTGTGGAGGGATGGCATACTGTGGACCTCAGGTT
GGAAAGGGCCTGATTCCCCACGGTGGCCTGGAGACCTCTCAGCCTGAGGTTGAGGTGGGAGCTGGGATGGAGAGCAACTC
TGAGGGGGCCTCCCCCGAGCCCTGCATTGCTCACCCTGCTGTTGTGAAAGTGGAGAAGGAGAAGATGGATCAAAACCCTG
AGGAGTCCCAAGATATCCAAGCTTTGCAGAAAGAACTTGAGGAATTTGCCAAGCTACTGAAGCAGAAGAGGATCAATCTG
GGATACACTCAGGCCGATGTGGGGCTTACCCTGGGGGTTCTCTTTGGGAAGGTGTTTAGCCAAACGACCATCTGCCGCTT
TGAGGCTCTGCAGCTCAGTTTCAAGAACATGTGCAAGCTGCGGCCCCTGCTGCAGAAGTGGGTGGAGGAAGCAGACAACA
ATGAGAACCTTCAGGAGATATGCAAAGCGGAGGCCCTACTGCAAGCCCGGAAGAGAAAGCGAACAAGTATCGAGAACCGA
GTGAGAGGCAACCTGGAGAACATGTTCCTGCAGTGCCCAAAACCCACCCTGCAGCAGATCAGCCACATTGCTGAACAGCT
GGGGCTTGAGAAGGACGTGGTCCGAGTGTGGTTCTGTAACCGGCGCCAGAAGGGCAAACGATCAAGCATTGATTATTCCC
AACGAGAGGATTTTGAAGCTGCAGCTTCTCCTTTCTCAGGGGGACCTGTATCCTTTCCTCTGGCCCCAGGGCCCCATTTT
GGTACCTCAGGTTATGGAAGCCCTCACTTCACCACACTCTATTCCCCACTTCCTTTTCCTGAGGGGGAAGCCTTTCCCTC
TGTCTCTGTCACCACTCTGGGCTCTCCCATGCATTCAAACTGA
ATGGCCGGACATCTGGCTTCGGACTTTGCCTTCTCGCCCCCTCCGGGCGGTGGGGGTGATGGGCCAGGAGGGCCGGAGCC
GGGCTGGATTGACCATCGGACCTGGCTAAGCTTCCCAGGCCCTCCCGGTGGTCCAGTAATCGGGCCAGGAGTTGGGCCAG
GTTCGGAGGTGTGGGGGATTCCCTCATATCCTCCGCCCCATGAGTTCTGTGGAGGGATGGCATACTGTGGACCTCAGGTT
GGAAAGGGCCTGATTCCCCACGGTGGCCTGGAGACCTCTCAGCCTGAGGTTGAGGTGGGAGCTGGGATGGAGAGCAACTC
TGAGGGGGCCTCCCCCGAGCCCTGCATTGCTCACCCTGCTGTTGTGAAAGTGGAGAAGGAGAAGATGGATCAAAACCCTG
AGGAGTCCCAAGATATCCAAGCTTTGCAGAAAGAACTTGAGGAATTTGCCAAGCTACTGAAGCAGAAGAGGATCAATCTG
GGATACACTCAGGCCGATGTGGGGCTTACCCTGGGGGTTCTCTTTGGGAAGGTGTTTAGCCAAACGACCATCTGCCGCTT
TGAGGCTCTGCAGCTCAGTTTCAAGAACATGTGCAAGCTGCGGCCCCTGCTGCAGAAGTGGGTGGAGGAAGCAGACAACA
ATGAGAACCTTCAGGAGATATGCAAAGCGGAGGCCCTACTGCAAGCCCGGAAGAGAAAGCGAACAAGTATCGAGAACCGA
GTGAGAGGCAACCTGGAGAACATGTTCCTGCAGTGCCCAAAACCCACCCTGCAGCAGATCAGCCACATTGCTGAACAGCT
GGGGCTTGAGAAGGACGTGGTCCGAGTGTGGTTCTGTAACCGGCGCCAGAAGGGCAAACGATCAAGCATTGATTATTCCC
AACGAGAGGATTTTGAAGCTGCAGCTTCTCCTTTCTCAGGGGGACCTGTATCCTTTCCTCTGGCCCCAGGGCCCCATTTT
GGTACCTCAGGTTATGGAAGCCCTCACTTCACCACACTCTATTCCCCACTTCCTTTTCCTGAGGGGGAAGCCTTTCCCTC
TGTCTCTGTCACCACTCTGGGCTCTCCCATGCATTCAAACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000010377 | ortholog_many2many | 3 retrogenes | |
| Bos taurus | ENSBTAG00000021111 | ortholog_many2many | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000000485 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000019789 | ortholog_many2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000003949 | possible_ortholog | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000009549 | ortholog_many2many | 1 retrogene | |
| Equus caballus | ENSECAG00000008967 | ortholog_one2many | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000015357 | ortholog_one2many | 2 retrogenes | |
| Felis catus | ENSFCAG00000001078 | ortholog_one2many | 3 retrogenes | |
| Gallus gallus | ENSGALG00000026574 | possible_ortholog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000027662 | ortholog_one2many | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000013221 | ortholog_one2many | 3 retrogenes | |
| Meleagris gallopavo | ENSMGAG00000000739 | possible_ortholog | 1 retrogene | |
| Microcebus murinus | ENSMICG00000001511 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000011028 | ortholog_one2many | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000001202 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000024406 | ortholog_one2many | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000017160 | ortholog_many2many | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000000621 | ortholog_one2many | 3 retrogenes | |
| Ochotona princeps | ENSOPRG00000003926 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000017210 | ortholog_one2many | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000017953 | ortholog_one2many | 5 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000007334 | ortholog_one2many | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000046487 | ortholog_one2many | 4 retrogenes | |
| Sus scrofa | ENSSSCG00000001393 | ortholog_one2many | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000013044 | ortholog_one2many | 4 retrogenes | |
| Taeniopygia guttata | ENSTGUG00000002412 | possible_ortholog | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000007340 | ortholog_one2many | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_951 | 82.78 | 74.72 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_1076 | 91.51 | 88.33 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_itri_1705 | 80.37 | 60.28 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000026103 retrocopies