Parental gene:

POU5F2, ENSDNOG00000003949

Aliases:None
Description:POU domain class 5, transcription factor 2 [Source:HGNC Symbol;Acc:26367]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_7163:26875..27850(-)


>ENSDNOG00000003949
TTTGCCAAGCTCCTGAAGCAGAAGCGCATCACGCTGGGGTACACCCAGGCCGACGTGGGGCTCACCCTGGGGGTGCTTTT
CGGCAAGGTGTTCAGCCAGACGACCATCTGCCGCTTCGAGGCCCTGCAGCTGAGCTTCAAGAACATGTGCAAGCTGCGGC
CCCTGCTCCAGAAGTGGGTGGAGGAGGCGGACAGCAACGAGAACCTCCAGGAGATATGCAAAACGGAGACCCTCCTGCAG
CAGGCCCGGAAGAGAAAGCGGACGAGCATCGAGAACAGAGTGAGGGGCAACCTGGAGAGCATGTTCCTGCAGTGCCCAAA
GCCCACGCTGCAGCAGATCAGCCACATCGCCCAGCAGCTCGGGCTGGAGAAGGACGTGGTCCGAGTGTGGTTCTGTAACC
GGCGCCAGAAGGGCAAGCGGTCGAGCAGTGACTGTCCACAGCGGGAGGAATTCGAGGCTGCCGGCTCTCCTTTCCCAGGG
GCACCCGTGTCCTTTCCTCTGGCACCAGGGCCCCACTTCGGGGCCCCGGGCTACGGGGGCCCTCACTTCGCTGCCCTGTA
CTCCTCTGTCCCTTTCCCAGAGGGGGAAGCCTTCCCCTCTGTCCAGGTGGGCAGTCTGGGCTCTCCCATGCATTCCAGCT
GA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 0 .00 RPM
SRP012922_cerebellum 0 .00 RPM
SRP012922_heart 0 .00 RPM
SRP012922_kidney 0 .00 RPM
SRP012922_liver 0 .00 RPM
SRP012922_lung 0 .15 RPM
SRP012922_quadricep_muscle 0 .00 RPM
SRP012922_spleen 0 .23 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010377 possible_ortholog 3 retrogenes
retro_amel_1057, retro_amel_1213, retro_amel_1616,
Bos taurus ENSBTAG00000021111 possible_ortholog 2 retrogenes
retro_btau_1576, retro_btau_951,
Callithrix jacchus ENSCJAG00000019789 possible_ortholog 1 retrogene
retro_cjac_123,
Dipodomys ordii ENSDORG00000009549 possible_ortholog 1 retrogene
retro_dord_65,
Macropus eugenii ENSMEUG00000013221 ortholog_one2one 3 retrogenes
retro_meug_1146, retro_meug_1475, retro_meug_692,
Mustela putorius furo ENSMPUG00000001202 possible_ortholog 2 retrogenes
retro_mputfur_253, retro_mputfur_96,
Mus musculus ENSMUSG00000024406 possible_ortholog 2 retrogenes
retro_mmus_2201, retro_mmus_250,
Oryctolagus cuniculus ENSOCUG00000017160 possible_ortholog 3 retrogenes
retro_ocun_1175, retro_ocun_1696, retro_ocun_463,
Ictidomys tridecemlineatus ENSSTOG00000026103 possible_ortholog 3 retrogenes
retro_itri_1076, retro_itri_1705, retro_itri_951,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_2267 83.56 68.08
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Download FASTA sequences of all ENSDNOG00000003949 retrocopies