Parental gene:

IMMP1L, ENSSSCG00000013322

Aliases:None
Description:IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) [Source:HGNC Symbol;Acc:26317]
Organism:Pig (Sus scrofa)
Coordinates:2:31737404..31813219(+)


>ENSSSCG00000013322
ATGCTTCGTGGTGTTCTGGGAAAAACCTTTCGACTTGTTGGCTATACTATTCAGTATGGCTGTATAGCTCATTGTGCTTT
TGAATACGTTGGTGGTGTTGTCATGTGTTCTGGACCATCAATGGAGCCTACAATTCAAAATCCAGATATTGTCTTTGCAG
AAAATCTTAGTCGACATTTTTATAGTATCCAAAGAGGTGACATTGTGATTGCAAAAAGCCCGAGTGATCCAAAGTCAAAT
ATTTGTAAAAGAGTAATTGGTTTGGAAGGAGACAAAATTCTCACCAATAGCCCATCAGGTTTCTTTAAAGGTCATAGTTA
TGTGCCAACAGGTCACGTTTGGTTAGAAGGTGATAATCTACAGAATTCTACAGATTCCAGGTACTATGGACCTGTTCCAT
ATGGACTAATAAGAGGACGTATCTTCTTTAAGATTTGGCCTCTGAGTGATTTTGGATTTCTGCGTGACAGCCCTAATAGC
TACAGATTTTCTGATGATTAG

Library Parental gene expression (RPM)
SRP014902_placenta 1 .73 RPM
SRP014902_testis 4 .53 RPM
SRP018856_adipose 3 .39 RPM
SRP018288_kidney 11 .03 RPM
SRP018288_lung 1 .73 RPM
SRP018288_liver 7 .04 RPM
SRP018288_heart 15 .35 RPM
SRP035408_liver 3 .32 RPM
SRP035408_brain 1 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006876 ortholog_one2one 1 retrogene
retro_amel_623,
Bos taurus ENSBTAG00000000475 ortholog_one2one 1 retrogene
retro_btau_528,
Canis familiaris ENSCAFG00000007514 ortholog_one2one 2 retrogenes
retro_cfam_1757, retro_cfam_548,
Choloepus hoffmanni ENSCHOG00000010106 ortholog_one2one 4 retrogenes
retro_chof_1157, retro_chof_1665, retro_chof_2427, retro_chof_358,
Callithrix jacchus ENSCJAG00000006042 ortholog_one2one 1 retrogene
retro_cjac_1240,
Dipodomys ordii ENSDORG00000000250 ortholog_one2one 4 retrogenes
retro_dord_144, retro_dord_205, retro_dord_243, retro_dord_726,
Equus caballus ENSECAG00000020512 ortholog_one2one 3 retrogenes
retro_ecab_1019, retro_ecab_159, retro_ecab_920,
Echinops telfairi ENSETEG00000003057 ortholog_one2one 1 retrogene
retro_etel_1971,
Homo sapiens ENSG00000148950 ortholog_one2one 1 retrogene
retro_hsap_786,
Gorilla gorilla ENSGGOG00000014897 ortholog_one2one 1 retrogene
retro_ggor_651,
Myotis lucifugus ENSMLUG00000006504 ortholog_one2many 2 retrogenes
retro_mluc_2105, retro_mluc_385,
Macaca mulatta ENSMMUG00000016806 ortholog_one2one 1 retrogene
retro_mmul_1092,
Mus musculus ENSMUSG00000042670 ortholog_one2one 2 retrogenes
retro_mmus_2571, retro_mmus_591,
Nomascus leucogenys ENSNLEG00000017882 ortholog_one2one 1 retrogene
retro_nleu_2484,
Oryctolagus cuniculus ENSOCUG00000029612 ortholog_one2one 1 retrogene
retro_ocun_388,
Otolemur garnettii ENSOGAG00000007853 ortholog_one2one 3 retrogenes
retro_ogar_1202, retro_ogar_2006, retro_ogar_2643,
Pongo abelii ENSPPYG00000003389 ortholog_one2one 1 retrogene
retro_pabe_747,
Pan troglodytes ENSPTRG00000003472 ortholog_one2one 1 retrogene
retro_ptro_547,
Pteropus vampyrus ENSPVAG00000015535 ortholog_one2one 1 retrogene
retro_pvam_932,
Rattus norvegicus ENSRNOG00000004829 ortholog_one2one 1 retrogene
retro_rnor_2450,
Sarcophilus harrisii ENSSHAG00000015407 ortholog_one2one 2 retrogenes
retro_shar_396, retro_shar_491,
Ictidomys tridecemlineatus ENSSTOG00000003179 ortholog_one2one 2 retrogenes
retro_itri_489, retro_itri_623,
Tupaia belangeri ENSTBEG00000002126 ortholog_one2one 6 retrogenes
retro_tbel_1510, retro_tbel_2503, retro_tbel_315, retro_tbel_3504, retro_tbel_4049, retro_tbel_878,
Tarsius syrichta ENSTSYG00000009257 ortholog_one2one 1 retrogene
retro_tsyr_2139,
Tursiops truncatus ENSTTRG00000002395 ortholog_one2one 2 retrogenes
retro_ttru_1862, retro_ttru_966,
Vicugna pacos ENSVPAG00000001940 ortholog_one2one 1 retrogene
retro_vpac_126,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_1178 83.89 89.16
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Download FASTA sequences of all ENSSSCG00000013322 retrocopies