Parental gene:

PRDX5, ENSSSCG00000013030

Aliases:None
Description:peroxiredoxin 5 [Source:HGNC Symbol;Acc:9355]
Organism:Pig (Sus scrofa)
Coordinates:2:6864026..6867851(-)


>ENSSSCG00000013030
ATGGCCCCGATCAAGGTGGGAGATGCCATCCCATCGGTGGTGGTGTTTGAAGGGGAGCCTGAGAAAAAGGTGAACCTGGC
AGAGCTGTTCAAGGGCAAGAAGGGGGTGCTGTTTGGAGTCCCTGGGGCCTTTACTCCTGGCTGTTCCAAGACCCACCTTC
CAGGGTTTGTGGAGCAGGCCGAAGCACTGAAGGCCAAGGGGATCCAAGTGGTGGCGTGTCTGAGTGTTAATGACGTCTTT
GTCACTGAAATGTGGGGACGAGCCCACAACACGGAAGGCAAGGTTCGGCTCCTGGCTGATCCCACTGGGGCCTTTGGGAA
GGAGACAGATTTATTACTAGATGATTCCTTGGTGTCTCTCTTTGGGAATCGACGGCTCAAGAGGTTCTCCATGGTGATCG
AGGATGGCATAGTGAAGTCCCTGAATGTGGAGCCAGATGGCACAGGCCTCACCTGCAGCCTGGCCCCCAACATCATCTCA
CAGCTCTGA

Library Parental gene expression (RPM)
SRP014902_placenta 12 .61 RPM
SRP014902_testis 43 .71 RPM
SRP018856_adipose 94 .93 RPM
SRP018288_kidney 142 .83 RPM
SRP018288_lung 115 .98 RPM
SRP018288_liver 116 .73 RPM
SRP018288_heart 7 .28 RPM
SRP035408_liver 333 .63 RPM
SRP035408_brain 108 .91 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017959 ortholog_one2one 1 retrogene
retro_amel_753,
Bos taurus ENSBTAG00000008648 ortholog_one2one 1 retrogene
retro_btau_1364,
Callithrix jacchus ENSCJAG00000018014 ortholog_one2many 1 retrogene
retro_cjac_3013,
Dasypus novemcinctus ENSDNOG00000004647 ortholog_one2one 1 retrogene
retro_dnov_2664,
Equus caballus ENSECAG00000017747 ortholog_one2one 2 retrogenes
retro_ecab_823, retro_ecab_844,
Echinops telfairi ENSETEG00000000264 ortholog_one2one 3 retrogenes
retro_etel_1821, retro_etel_662, retro_etel_740,
Felis catus ENSFCAG00000028856 ortholog_one2many 3 retrogenes
retro_fcat_1189, retro_fcat_410, retro_fcat_727,
Homo sapiens ENSG00000126432 ortholog_one2one 1 retrogene
retro_hsap_408,
Gorilla gorilla ENSGGOG00000001337 ortholog_one2one 1 retrogene
retro_ggor_404,
Loxodonta africana ENSLAFG00000025661 ortholog_one2one 2 retrogenes
retro_lafr_132, retro_lafr_250,
Macaca mulatta ENSMMUG00000013397 ortholog_one2one 1 retrogene
retro_mmul_504,
Mustela putorius furo ENSMPUG00000012907 ortholog_one2one 1 retrogene
retro_mputfur_1360,
Nomascus leucogenys ENSNLEG00000005003 ortholog_one2one 2 retrogenes
retro_nleu_1007, retro_nleu_2228,
Procavia capensis ENSPCAG00000010811 ortholog_one2one 1 retrogene
retro_pcap_144,
Pongo abelii ENSPPYG00000003106 ortholog_one2one 1 retrogene
retro_pabe_310,
Pan troglodytes ENSPTRG00000003835 ortholog_one2one 1 retrogene
retro_ptro_313,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_888 53.93 54.32
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_sscr_1041 52.17 69.75
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSSSCG00000013030 retrocopies