Parental gene:

PRDX5, ENSECAG00000017747

Aliases:None
Description:peroxiredoxin 5 [Source:HGNC Symbol;Acc:9355]
Organism:Horse (Equus caballus)
Coordinates:12:24611438..24614297(+)


>ENSECAG00000017747
CCCCCAATCAAGGTGGGAGACGCCATTCCGTCAGTGGTGGTGTTTGAAGGGGACCCTGCGAACAAGGTCAACCTGGCGGA
GCTGTTCAAGGGCAAGAAGGGGGTGCTGTTTGGAGTCCCGGGGGCCTTTACCCCCGGCTGTTCCAAGACCCACCTGCCAG
GGTTTGTAGAGCAGGCTGCGGCCCTGAAGGCCAAAGGGGTCGAGGTGGTGGCGTGTCTGACTGTTAACGATGTCTTTGTG
ACTGAAGAGTGGGGACGAGCCCACAACACGAAAGGCAAGGTTCGGCTCCTGGCTGACCCCACTGGGGCCTTTGGAAAGGA
GACAGATTTGTTACTAGATGATTCCTTGGTGTCCCTCTTTGGGAACCGACGGCTCAAGAGGTTCTCCATGGTGATAGAGG
ATGGCATAGTGAAGTCCCTGAACGTGGAACCGGACGGCACCGGCCTCACCTGCAGCCTCGCCCCCAACATCATCTCCCAG
CTCTGA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 56 .99 RPM
SRP021940_embryo 79 .28 RPM
SRP021940_cerebellum 169 .09 RPM
SRP021940_testis 147 .96 RPM
SRP021940_placental_villous 264 .18 RPM
SRP021940_articular_cartilage 87 .36 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017959 ortholog_one2one 1 retrogene
retro_amel_753,
Bos taurus ENSBTAG00000008648 ortholog_one2one 1 retrogene
retro_btau_1364,
Callithrix jacchus ENSCJAG00000018014 ortholog_one2many 1 retrogene
retro_cjac_3013,
Dasypus novemcinctus ENSDNOG00000004647 ortholog_one2one 1 retrogene
retro_dnov_2664,
Echinops telfairi ENSETEG00000000264 ortholog_one2one 3 retrogenes
retro_etel_1821, retro_etel_662, retro_etel_740,
Felis catus ENSFCAG00000028856 ortholog_one2many 3 retrogenes
retro_fcat_1189, retro_fcat_410, retro_fcat_727,
Homo sapiens ENSG00000126432 ortholog_one2one 1 retrogene
retro_hsap_408,
Gorilla gorilla ENSGGOG00000001337 ortholog_one2one 1 retrogene
retro_ggor_404,
Loxodonta africana ENSLAFG00000025661 ortholog_one2one 2 retrogenes
retro_lafr_132, retro_lafr_250,
Macaca mulatta ENSMMUG00000013397 ortholog_one2one 1 retrogene
retro_mmul_504,
Mustela putorius furo ENSMPUG00000012907 ortholog_one2one 1 retrogene
retro_mputfur_1360,
Nomascus leucogenys ENSNLEG00000005003 ortholog_one2one 2 retrogenes
retro_nleu_1007, retro_nleu_2228,
Procavia capensis ENSPCAG00000010811 ortholog_one2one 1 retrogene
retro_pcap_144,
Pongo abelii ENSPPYG00000003106 ortholog_one2one 1 retrogene
retro_pabe_310,
Pan troglodytes ENSPTRG00000003835 ortholog_one2one 1 retrogene
retro_ptro_313,
Sus scrofa ENSSSCG00000013030 ortholog_one2one 2 retrogenes
retro_sscr_1041, retro_sscr_888,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_823 68.94 100.00
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2. retro_ecab_844 55.91 77.02
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Download FASTA sequences of all ENSECAG00000017747 retrocopies